Detailed information NTG0721700

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NXY85_RS18445
• Genome accession: NZ_CP103290
• Coordinates: 3638482..3639630 (+)
• Length: 382 a.a.
• NCBI ID: WP_004430265.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain NS2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3633482..3644630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NXY85_RS18425	-	3633806..3634486 (-)	681	WP_258728607.1	ABC transporter ATP-binding protein	-
NXY85_RS18430	-	3634504..3635982 (-)	1479	WP_258728608.1	ABC transporter permease	-
NXY85_RS18435	-	3636197..3636883 (+)	687	WP_106045683.1	response regulator transcription factor	-
NXY85_RS18440	-	3636870..3638288 (+)	1419	WP_258728609.1	HAMP domain-containing sensor histidine kinase	-
NXY85_RS18445	rapC	3638482..3639630 (+)	1149	WP_004430265.1	tetratricopeptide repeat protein	Regulator
NXY85_RS18450	phrC	3639614..3639733 (+)	120	WP_004430266.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NXY85_RS18455	-	3639867..3639974 (-)	108	WP_072053240.1	YjcZ family sporulation protein	-
NXY85_RS18460	-	3640178..3640261 (-)	84	WP_370499808.1	YjcZ family sporulation protein	-
NXY85_RS18465	-	3640392..3641756 (-)	1365	WP_258728610.1	aspartate kinase	-
NXY85_RS18470	ceuB	3642188..3643138 (+)	951	WP_258728611.1	ABC transporter permease	Machinery gene
NXY85_RS18475	-	3643131..3644078 (+)	948	WP_010789704.1	iron chelate uptake ABC transporter family permease subunit	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45756.03 Da
• Isoelectric Point: 4.8173

>NTDB_id=721700 NXY85_RS18445 WP_004430265.1 3638482..3639630(+) (rapC) [Bacillus atrophaeus strain NS2]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=721700 NXY85_RS18445 WP_004430265.1 3638482..3639630(+) (rapC) [Bacillus atrophaeus strain NS2]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATACGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGCCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCTCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_1) (224-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	85.079	100	0.851
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571