Detailed information NTG0721187

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NW905_RS07390
• Genome accession: NZ_CP103054
• Coordinates: 1632462..1634678 (+)
• Length: 738 a.a.
• NCBI ID: WP_258800850.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain P33
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1627462..1639678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NW905_RS07360 (NW905_07360)	-	1628320..1628559 (-)	240	WP_028690971.1	DUF3077 domain-containing protein	-
NW905_RS07365 (NW905_07365)	-	1628556..1628795 (-)	240	WP_062573271.1	hypothetical protein	-
NW905_RS07370 (NW905_07370)	-	1629328..1629951 (+)	624	WP_258800849.1	glutathione S-transferase	-
NW905_RS07375 (NW905_07375)	-	1630084..1631016 (+)	933	WP_062573273.1	ABC transporter ATP-binding protein	-
NW905_RS07380 (NW905_07380)	-	1631013..1631792 (+)	780	WP_062573274.1	ABC transporter permease	-
NW905_RS07385 (NW905_07385)	-	1631676..1632317 (-)	642	WP_052896362.1	DUF2062 domain-containing protein	-
NW905_RS07390 (NW905_07390)	comA	1632462..1634678 (+)	2217	WP_258800850.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NW905_RS07395 (NW905_07395)	exbB	1634830..1635465 (+)	636	WP_084942595.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
NW905_RS07400 (NW905_07400)	-	1635462..1635896 (+)	435	WP_028690977.1	biopolymer transporter ExbD	-
NW905_RS07405 (NW905_07405)	lpxK	1635896..1636900 (+)	1005	WP_062573277.1	tetraacyldisaccharide 4'-kinase	-
NW905_RS07410 (NW905_07410)	-	1636935..1637120 (+)	186	WP_011532874.1	Trm112 family protein	-
NW905_RS07415 (NW905_07415)	kdsB	1637117..1637881 (+)	765	WP_096048370.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NW905_RS07420 (NW905_07420)	-	1637881..1638345 (+)	465	WP_062573279.1	low molecular weight protein-tyrosine-phosphatase	-
NW905_RS07425 (NW905_07425)	murB	1638342..1639361 (+)	1020	WP_062573280.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79756.31 Da
• Isoelectric Point: 10.8701

>NTDB_id=721187 NW905_RS07390 WP_258800850.1 1632462..1634678(+) (comA) [Pseudomonas mosselii strain P33]
MRTGMLALVLGLLSLRFLPTLPPVGWLIPLLLLAVASLRTRAWPLGWLALGVCWACWSAQQALDDRLPAALDGRTLWLEG
RVVGLPTRTERGVRFELEQPQSRRARLPQRVQLSWFEGPPLRAGEHWRLAVNVRRPQGLLNPHGPDQEATLLARRVGATG
TVKAGTRQGEEASSWRDGLRQRLLATDAHGREAALAALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLLAGLVYGL
VAGLARLGAWPRWLPWVPWACGLAMAAALAYGWLAGFGVPVQRACLMLAVVLLWRLRFRHLGAWVPLLMALSGVLLVEPL
ASLLPGFWLSFGAVAVLVLCFAARLGAWRPWQAWTRGQWVIAVGLLPVLLALGLPVSLSAPLANLLAVPWLSLGVLPLAL
LGTALLPVPGLGEVMLWLAGLSLDGLFAVLTRLAGLQPAWIPESLPLWAWLLVCLGAVLVLLPRGVPLRAPGAVMLLALW
APREQVPAGQVEVWQLDVGQGLAVLLRTRNHALLYDAGPAQGGRDLGETVVLPTLRKLGVNALDVMLISHGHADHAGGAA
AVRRGVPVARVLAGEVAGLEAASLCRSGERWQWDGVDFELWHWPQGASSNERSCVLRVQANGERLLLAGDMEAGAERAWL
AATDDPRVDWLQAPHHGSRTSSSEPFVQATAPRAVLISRGRHNGFGHPHGQVIERYRRHGVVVHDTAVEGALRLVLGSRG
GVEGVRRERRFWREVDEG

Nucleotide

• Length: 2217 bp

>NTDB_id=721187 NW905_RS07390 WP_258800850.1 1632462..1634678(+) (comA) [Pseudomonas mosselii strain P33]
ATGCGCACAGGGATGCTGGCGCTGGTGCTCGGGCTGCTGAGCCTGCGTTTTCTACCTACCCTGCCACCGGTCGGATGGCT
GATTCCATTGCTCTTGCTGGCCGTTGCCAGCCTGCGTACCCGGGCCTGGCCGTTGGGTTGGTTGGCGCTGGGTGTGTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTGGACGACCGCCTGCCTGCCGCGCTGGATGGCCGCACGCTGTGGCTGGAGGGG
CGGGTGGTCGGCCTGCCGACCCGTACCGAGCGCGGCGTGCGTTTCGAGCTGGAGCAGCCGCAGTCACGCCGGGCCCGGTT
GCCGCAGCGGGTGCAATTGAGCTGGTTCGAGGGGCCGCCGCTGAGGGCGGGGGAGCACTGGCGGCTGGCGGTCAACGTGC
GTCGGCCGCAGGGCCTGCTCAACCCCCATGGCCCGGATCAGGAGGCCACGCTGTTGGCGCGGCGGGTCGGTGCCACCGGC
ACGGTCAAGGCCGGTACGCGCCAGGGCGAGGAGGCCAGCAGTTGGCGCGACGGCCTGCGCCAGCGCCTGCTGGCCACCGA
TGCCCATGGCCGGGAGGCGGCGTTGGCCGCCCTGGTGCTCGGGGATGGCGCAGGCCTGGCGCGGGAGGACTGGCAGGTGC
TGCAGGCCACCGGCACGGTACACCTGCTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCCGGATTGGTCTACGGGCTG
GTGGCGGGGCTGGCGCGCCTGGGGGCCTGGCCCCGGTGGTTGCCGTGGGTGCCCTGGGCCTGTGGCCTGGCGATGGCGGC
GGCATTGGCCTACGGCTGGCTGGCGGGGTTCGGCGTGCCGGTGCAGCGGGCGTGCCTGATGCTGGCGGTGGTGCTGCTCT
GGCGCTTGCGCTTTCGCCATCTGGGCGCCTGGGTGCCGTTGCTGATGGCGCTGTCGGGCGTGCTGCTGGTCGAGCCGCTG
GCCAGCCTGTTGCCGGGGTTCTGGCTGTCGTTCGGTGCGGTGGCGGTGCTGGTGCTGTGTTTTGCCGCCCGGCTGGGCGC
CTGGCGGCCCTGGCAGGCCTGGACCCGCGGCCAGTGGGTGATCGCCGTGGGGTTGCTGCCGGTGCTGCTGGCCTTGGGGC
TGCCCGTCAGCCTCAGTGCGCCGCTGGCCAATCTGCTGGCCGTGCCGTGGCTGAGCTTGGGTGTGCTGCCGCTGGCGTTG
CTGGGTACGGCCCTGTTGCCGGTGCCTGGGCTGGGGGAGGTGATGCTGTGGCTGGCGGGGCTGTCGTTGGATGGGCTGTT
TGCCGTGTTGACGCGATTGGCAGGGCTGCAGCCGGCCTGGATACCTGAGTCACTGCCCTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGTGCCGTGCTGGTGTTGCTGCCCCGGGGCGTGCCGTTGCGGGCGCCGGGCGCGGTCATGCTGCTGGCGCTGTGG
GCACCACGCGAGCAGGTGCCTGCGGGGCAAGTGGAGGTCTGGCAGCTGGATGTGGGGCAGGGCCTGGCGGTGCTGCTGCG
CACCCGCAATCACGCCTTGCTGTATGACGCAGGTCCGGCCCAGGGTGGCAGGGACCTGGGCGAGACGGTAGTGCTGCCGA
CCTTGCGCAAGCTTGGGGTGAACGCGCTGGATGTGATGCTGATCAGCCATGGCCATGCCGACCATGCCGGTGGGGCGGCG
GCGGTGCGGCGTGGGGTGCCGGTGGCGCGGGTGCTGGCCGGCGAGGTTGCCGGGCTGGAAGCGGCCTCGCTGTGCCGCAG
TGGCGAGCGCTGGCAGTGGGATGGCGTCGATTTCGAGCTCTGGCACTGGCCGCAGGGGGCTTCCAGCAACGAGCGTTCCT
GTGTGTTGCGGGTGCAGGCCAATGGGGAGCGCTTGCTGCTGGCCGGGGACATGGAGGCCGGCGCGGAGCGTGCGTGGCTG
GCTGCGACCGACGATCCTCGGGTGGACTGGTTGCAGGCACCGCACCATGGCAGCCGCACGTCGTCCAGCGAGCCGTTCGT
CCAGGCCACGGCACCGCGCGCGGTGCTGATTTCCCGGGGGCGGCACAATGGTTTCGGGCATCCCCATGGGCAGGTGATCG
AGCGCTATCGCCGGCACGGGGTGGTGGTGCATGACACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGAGTCGGGGT
GGGGTGGAGGGTGTGCGCAGGGAGCGGCGGTTCTGGCGAGAGGTTGACGAGGGCTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-166)

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-672)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.11	97.425	0.576
comA	Ralstonia pseudosolanacearum GMI1000	35.773	100	0.411