Detailed information NTG0720791

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: PUW71_RS04725
• Genome accession: NZ_CP118053
• Coordinates: 936097..937209 (-)
• Length: 370 a.a.
• NCBI ID: WP_003024631.1
• Uniprot ID: A0A0P0N8U3
• Organism: Streptococcus anginosus strain VSI40
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 931097..942209

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW71_RS04700 (PUW71_04700)	msrA	932260..932832 (-)	573	Protein_886	peptide-methionine (S)-S-oxide reductase MsrA	-
PUW71_RS04705 (PUW71_04705)	-	932842..933405 (-)	564	WP_150888730.1	redoxin domain-containing protein	-
PUW71_RS04710 (PUW71_04710)	ccdA2	933419..934132 (-)	714	WP_150888727.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
PUW71_RS04715 (PUW71_04715)	brnQ	934266..935594 (-)	1329	WP_150888724.1	branched-chain amino acid transport system II carrier protein	-
PUW71_RS04720 (PUW71_04720)	-	935749..936078 (-)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
PUW71_RS04725 (PUW71_04725)	rpoS	936097..937209 (-)	1113	WP_003024631.1	RNA polymerase sigma factor RpoD	Regulator
PUW71_RS04730 (PUW71_04730)	dnaG	937212..938987 (-)	1776	WP_306789868.1	DNA primase	-
PUW71_RS04735 (PUW71_04735)	mscL	939142..939522 (+)	381	WP_022525808.1	large conductance mechanosensitive channel protein MscL	-
PUW71_RS04740 (PUW71_04740)	rpsU	939764..939940 (-)	177	WP_000048054.1	30S ribosomal protein S21	-
PUW71_RS04745 (PUW71_04745)	-	940135..940473 (-)	339	WP_003024641.1	ATP cone domain-containing protein	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42439.09 Da
• Isoelectric Point: 4.4643

>NTDB_id=720791 PUW71_RS04725 WP_003024631.1 936097..937209(-) (rpoS) [Streptococcus anginosus strain VSI40]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=720791 PUW71_RS04725 WP_003024631.1 936097..937209(-) (rpoS) [Streptococcus anginosus strain VSI40]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAAGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAACGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAAGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTACTACGTTTGCGATTC
GGTCTAGATGATGGTAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAGGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

3D structure

• AlphaFold DB: A0A0P0N8U3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37