Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   PUW71_RS04890 Genome accession   NZ_CP118053
Coordinates   970918..971388 (-) Length   156 a.a.
NCBI ID   WP_024051595.1    Uniprot ID   A0ABS3GEW8
Organism   Streptococcus anginosus strain VSI40     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 965918..976388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW71_RS04870 (PUW71_04870) - 965920..966471 (-) 552 WP_024051591.1 GNAT family N-acetyltransferase -
  PUW71_RS04875 (PUW71_04875) - 966550..967809 (-) 1260 WP_024051592.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  PUW71_RS04880 (PUW71_04880) metK 968169..969362 (-) 1194 WP_024051593.1 methionine adenosyltransferase -
  PUW71_RS04885 (PUW71_04885) - 969628..970905 (-) 1278 WP_150888700.1 dihydroorotase -
  PUW71_RS04890 (PUW71_04890) mutX 970918..971388 (-) 471 WP_024051595.1 8-oxo-dGTP diphosphatase Machinery gene
  PUW71_RS04895 (PUW71_04895) - 971425..972078 (-) 654 WP_024051596.1 uracil-DNA glycosylase -
  PUW71_RS04900 (PUW71_04900) - 972102..973088 (-) 987 WP_024051597.1 Gfo/Idh/MocA family oxidoreductase -
  PUW71_RS04905 (PUW71_04905) - 973718..974278 (-) 561 WP_230309747.1 DUF805 domain-containing protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18003.38 Da        Isoelectric Point: 4.5321

>NTDB_id=720792 PUW71_RS04890 WP_024051595.1 970918..971388(-) (mutX) [Streptococcus anginosus strain VSI40]
MVKLATICYVDNGKEFLLLHRNKKPNDVHAGKWIGVGGKLEKGETPQECAVREILEETGLRVNKPVLKGIITFPDFTPDN
DWYTYVFKVTEFEGDLIDCDEGTLEWVSYEEILSKPTWEGDHTFLSWILEDKPFFSAKFSYKGEKLVESHVDYYGE

Nucleotide


Download         Length: 471 bp        

>NTDB_id=720792 PUW71_RS04890 WP_024051595.1 970918..971388(-) (mutX) [Streptococcus anginosus strain VSI40]
ATGGTTAAATTAGCAACAATTTGCTATGTGGACAATGGAAAAGAATTTCTGTTGTTGCATCGAAATAAAAAGCCTAATGA
TGTTCATGCTGGCAAATGGATTGGTGTTGGCGGAAAATTAGAGAAAGGTGAAACACCGCAGGAATGTGCGGTGCGAGAAA
TCTTGGAAGAAACGGGTTTGCGAGTCAATAAGCCCGTATTAAAAGGTATTATCACGTTTCCAGATTTTACACCTGATAAT
GACTGGTACACGTACGTATTTAAAGTGACAGAATTTGAGGGAGACTTGATTGACTGCGATGAAGGTACTTTGGAATGGGT
TTCCTATGAAGAAATTTTGTCCAAACCGACTTGGGAGGGAGATCATACGTTTCTATCTTGGATTTTAGAAGATAAACCAT
TCTTCTCGGCTAAATTTTCTTACAAAGGAGAGAAGTTGGTGGAGAGTCATGTTGATTATTATGGAGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(5-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.169

98.718

0.801