Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   PUW71_RS01140 Genome accession   NZ_CP118053
Coordinates   206161..206487 (+) Length   108 a.a.
NCBI ID   WP_264342122.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI40     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 201161..211487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW71_RS01105 (PUW71_01105) - 202452..202817 (+) 366 WP_024053131.1 DUF1033 family protein -
  PUW71_RS01110 (PUW71_01110) comGA 202887..203828 (+) 942 WP_024053130.1 competence type IV pilus ATPase ComGA Machinery gene
  PUW71_RS01115 (PUW71_01115) comGB 203770..204792 (+) 1023 WP_171021869.1 competence type IV pilus assembly protein ComGB Machinery gene
  PUW71_RS01120 (PUW71_01120) comGC 204789..205106 (+) 318 WP_003028473.1 competence type IV pilus major pilin ComGC Machinery gene
  PUW71_RS01125 (PUW71_01125) comGD 205096..205494 (+) 399 WP_022525973.1 competence type IV pilus minor pilin ComGD Machinery gene
  PUW71_RS01130 (PUW71_01130) comGE/cglE 205466..205759 (+) 294 WP_195916332.1 competence type IV pilus minor pilin ComGE Machinery gene
  PUW71_RS01135 (PUW71_01135) comGF/cglF 205743..206180 (+) 438 WP_195916333.1 competence type IV pilus minor pilin ComGF Machinery gene
  PUW71_RS01140 (PUW71_01140) comGG/cglG 206161..206487 (+) 327 WP_264342122.1 competence type IV pilus minor pilin ComGG Machinery gene
  PUW71_RS01145 (PUW71_01145) comGH 206559..207512 (+) 954 WP_195916334.1 class I SAM-dependent methyltransferase Machinery gene
  PUW71_RS01150 (PUW71_01150) - 207559..208758 (+) 1200 WP_049517013.1 acetate kinase -
  PUW71_RS01155 (PUW71_01155) glmS 209153..210967 (+) 1815 WP_195916352.1 glutamine--fructose-6-phosphate transaminase (isomerizing) -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12881.06 Da        Isoelectric Point: 10.8679

>NTDB_id=720742 PUW71_RS01140 WP_264342122.1 206161..206487(+) (comGG/cglG) [Streptococcus anginosus strain VSI40]
MWKQKVKAGIMLYALFMAAVFSLLLQFYLRRQTANHRNFTLNRERTQAYAMALLANENSKQREFDKGYVQDQKSEKELIL
TVTMKTGRRYQFSFSAKKEKQMDKKLNK

Nucleotide


Download         Length: 327 bp        

>NTDB_id=720742 PUW71_RS01140 WP_264342122.1 206161..206487(+) (comGG/cglG) [Streptococcus anginosus strain VSI40]
GTGTGGAAACAGAAAGTTAAAGCGGGCATTATGCTCTATGCACTCTTTATGGCGGCAGTTTTTAGCTTGCTTTTGCAATT
TTACCTTCGTCGTCAAACTGCTAATCATAGAAATTTCACCCTAAACCGAGAACGAACACAGGCTTATGCAATGGCTCTTC
TAGCCAACGAAAATTCTAAGCAAAGGGAATTTGATAAAGGGTATGTCCAAGACCAAAAGAGTGAGAAAGAGCTCATCCTG
ACAGTAACAATGAAGACTGGTCGCCGTTATCAATTTTCTTTTTCGGCTAAAAAAGAAAAGCAGATGGATAAAAAATTGAA
TAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

47.059

94.444

0.444
  comGG/cglG Streptococcus mitis SK321

43.137

94.444

0.407
  comGG/cglG Streptococcus pneumoniae TIGR4

41.584

93.519

0.389
  comGG/cglG Streptococcus pneumoniae D39

41.584

93.519

0.389
  comGG/cglG Streptococcus pneumoniae R6

41.584

93.519

0.389
  comGG/cglG Streptococcus pneumoniae Rx1

41.584

93.519

0.389
  comGG Streptococcus mutans UA159

39.806

95.37

0.38
  comGG Streptococcus mutans UA140

39.806

95.37

0.38