Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NW969_RS04305 Genome accession   NZ_CP102958
Coordinates   917179..918165 (+) Length   328 a.a.
NCBI ID   WP_103188523.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 15-G-54     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 912179..923165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW969_RS04285 (NW969_04285) - 912613..914259 (+) 1647 WP_040968626.1 IS1182 family transposase -
  NW969_RS04290 (NW969_04290) trpS 914288..915277 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  NW969_RS04295 (NW969_04295) spxA 915572..915967 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  NW969_RS04300 (NW969_04300) mecA 916339..917058 (+) 720 WP_001217728.1 adaptor protein MecA -
  NW969_RS04305 (NW969_04305) coiA 917179..918165 (+) 987 WP_103188523.1 competence protein CoiA family protein Machinery gene
  NW969_RS04310 (NW969_04310) pepF 918213..920021 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  NW969_RS04315 (NW969_04315) yjbH 920481..921287 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  NW969_RS04320 (NW969_04320) - 921310..921675 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  NW969_RS04325 (NW969_04325) - 921779..922372 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  NW969_RS04330 (NW969_04330) - 922558..922905 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38869.47 Da        Isoelectric Point: 9.5881

>NTDB_id=720450 NW969_RS04305 WP_103188523.1 917179..918165(+) (coiA) [Staphylococcus aureus strain 15-G-54]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=720450 NW969_RS04305 WP_103188523.1 917179..918165(+) (coiA) [Staphylococcus aureus strain 15-G-54]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

99.085

100

0.991
  coiA Staphylococcus aureus N315

98.476

100

0.985