Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   NW981_RS07685 Genome accession   NZ_CP102956
Coordinates   1608796..1609482 (-) Length   228 a.a.
NCBI ID   WP_258410046.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 26-G-G     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1603796..1614482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW981_RS07665 (NW981_07665) rpsT 1604710..1604961 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  NW981_RS07670 (NW981_07670) holA 1605006..1605980 (-) 975 WP_001282562.1 DNA polymerase III subunit delta -
  NW981_RS07675 (NW981_07675) comEC 1606037..1608238 (-) 2202 WP_258410045.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NW981_RS07680 (NW981_07680) - 1608243..1608704 (-) 462 WP_000439693.1 ComE operon protein 2 -
  NW981_RS07685 (NW981_07685) comEA 1608796..1609482 (-) 687 WP_258410046.1 ComEA family DNA-binding protein Machinery gene
  NW981_RS07690 (NW981_07690) - 1609522..1610238 (-) 717 WP_258410047.1 class I SAM-dependent methyltransferase -
  NW981_RS07695 (NW981_07695) rsfS 1610241..1610594 (-) 354 WP_001088022.1 ribosome silencing factor -
  NW981_RS07700 (NW981_07700) yqeK 1610595..1611179 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  NW981_RS07705 (NW981_07705) nadD 1611169..1611738 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  NW981_RS07710 (NW981_07710) yhbY 1611741..1612031 (-) 291 WP_258410048.1 ribosome assembly RNA-binding protein YhbY -
  NW981_RS07715 (NW981_07715) aroE 1612035..1612841 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  NW981_RS07720 (NW981_07720) yqeH 1612855..1613955 (-) 1101 WP_258410049.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25903.60 Da        Isoelectric Point: 9.5273

>NTDB_id=720382 NW981_RS07685 WP_258410046.1 1608796..1609482(-) (comEA) [Staphylococcus aureus strain 26-G-G]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=720382 NW981_RS07685 WP_258410046.1 1608796..1609482(-) (comEA) [Staphylococcus aureus strain 26-G-G]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGTACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

99.123

100

0.991
  comEA Staphylococcus aureus MW2

97.368

100

0.974