Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   NWE25_RS14980 Genome accession   NZ_CP102866
Coordinates   3086477..3088768 (-) Length   763 a.a.
NCBI ID   WP_038459663.1    Uniprot ID   -
Organism   Bacillus velezensis strain YS-AT-DS1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3081477..3093768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWE25_RS14940 (NWE25_14940) - 3081937..3082368 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  NWE25_RS14945 (NWE25_14945) - 3082368..3082709 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  NWE25_RS14950 (NWE25_14950) - 3082702..3084183 (+) 1482 WP_038459658.1 Na+/H+ antiporter subunit D -
  NWE25_RS14955 (NWE25_14955) - 3084189..3084665 (+) 477 WP_038459660.1 Na+/H+ antiporter subunit E -
  NWE25_RS14960 (NWE25_14960) - 3084665..3084949 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  NWE25_RS14965 (NWE25_14965) mnhG 3084933..3085307 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  NWE25_RS14970 (NWE25_14970) - 3085347..3085730 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  NWE25_RS14975 (NWE25_14975) comA 3085752..3086396 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  NWE25_RS14980 (NWE25_14980) comP 3086477..3088768 (-) 2292 WP_038459663.1 histidine kinase Regulator
  NWE25_RS14985 (NWE25_14985) comX 3088780..3088944 (-) 165 WP_007613432.1 competence pheromone ComX -
  NWE25_RS14990 (NWE25_14990) - 3088944..3089855 (-) 912 WP_079891857.1 polyprenyl synthetase family protein -
  NWE25_RS14995 (NWE25_14995) degQ 3090007..3090147 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  NWE25_RS15000 (NWE25_15000) - 3090613..3090954 (+) 342 WP_038459666.1 hypothetical protein -
  NWE25_RS15005 (NWE25_15005) - 3090961..3092184 (-) 1224 WP_032876792.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88455.68 Da        Isoelectric Point: 7.6016

>NTDB_id=719444 NWE25_RS14980 WP_038459663.1 3086477..3088768(-) (comP) [Bacillus velezensis strain YS-AT-DS1]
MKSKYNKVSVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYNGNVKAFDERDSSLIDDYQVLLNSVTIEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=719444 NWE25_RS14980 WP_038459663.1 3086477..3088768(-) (comP) [Bacillus velezensis strain YS-AT-DS1]
ATGAAGTCCAAGTACAATAAGGTTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATTA
AAATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGATCGGCAAAAGGCGATTTACTTAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTATGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACAACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGGGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATAATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTATTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAA
GAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544