Detailed information NTG0716789

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: NR756_RS19925
• Genome accession: NZ_CP102389
• Coordinates: 4307642..4309012 (+)
• Length: 456 a.a.
• NCBI ID: WP_055099444.1
• Uniprot ID: -
• Organism: Alloalcanivorax xenomutans strain AX
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4302642..4314012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NR756_RS19905 (NR756_19890)	-	4302917..4303732 (+)	816	WP_022996657.1	outer membrane protein assembly factor BamD	-
NR756_RS19910 (NR756_19895)	-	4303785..4305410 (-)	1626	WP_416391252.1	NAD+ synthase	-
NR756_RS19915 (NR756_19900)	-	4305776..4306036 (+)	261	WP_022996659.1	PP0621 family protein	-
NR756_RS19920 (NR756_19905)	-	4306056..4307639 (+)	1584	WP_416391253.1	ATP-binding protein	-
NR756_RS19925 (NR756_19910)	pilR	4307642..4309012 (+)	1371	WP_055099444.1	sigma-54-dependent transcriptional regulator	Regulator
NR756_RS19930 (NR756_19915)	-	4308985..4310070 (-)	1086	WP_063139866.1	NAD(P)/FAD-dependent oxidoreductase	-
NR756_RS19935 (NR756_19920)	-	4310199..4310687 (+)	489	WP_022996663.1	GspH/FimT family protein	-
NR756_RS19940	-	4310717..4311136 (-)	420	WP_416391255.1	type IV pilin protein	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 50375.49 Da
• Isoelectric Point: 5.6549

>NTDB_id=716789 NR756_RS19925 WP_055099444.1 4307642..4309012(+) (pilR) [Alloalcanivorax xenomutans strain AX]
MNDIIPRVLVVDDEADLRELLVITLGRMKLEATAADSLAAAQRLLDRDTFHLCLTDMNLGDGSGLQLIRYAAEKAPDMPI
AVLTAFGNMETATEAMKLGAYDFIAKPVSLDRLRQLIQDGLGISRHGAANGGEDDGLIGQSPAMQHLRRQIRKLARSQAP
IYISGESGSGKEKVARLIHTLGPRGDHPFVAVNCGAIPSELMESEFFGHRKGSFTGAVEDRKGLFREADGGTLFLDEVAD
LPLHMQVKLLRAIQEKTVRPVGESREFSVNLRILCATHKDLSEEMQAGRFRQDLYYRLNVIEAHVPPLRERLEDVPALVE
HILSRLGIAWDTTPPTLSNGTLAALRDYPFPGNVRELENVLERAMTLCDGNVIEPAHLRLPSQASSEAPSQGGSRDPALP
LEDYLQDIERQEILKALDATHWNRTAAAKKLGMTFRSLRYRLKKLALDQEEEEGSA

Nucleotide

• Length: 1371 bp

>NTDB_id=716789 NR756_RS19925 WP_055099444.1 4307642..4309012(+) (pilR) [Alloalcanivorax xenomutans strain AX]
ATGAATGACATAATTCCGCGTGTTTTGGTTGTGGACGACGAAGCGGACCTGAGAGAACTTCTGGTCATCACCCTCGGGCG
GATGAAATTGGAAGCAACGGCCGCGGACTCCCTGGCCGCCGCCCAGCGGCTGCTGGATCGCGACACCTTTCATCTTTGCC
TGACCGATATGAACCTGGGCGATGGCTCCGGTTTACAGCTGATCCGCTACGCGGCGGAGAAGGCGCCAGACATGCCCATC
GCGGTACTCACCGCATTCGGCAACATGGAGACCGCCACCGAAGCGATGAAACTGGGGGCCTACGATTTCATCGCCAAACC
CGTCTCGCTGGACCGGCTGCGGCAGTTGATTCAGGACGGCCTCGGCATCAGCCGCCATGGCGCCGCCAACGGCGGCGAGG
ACGATGGTCTGATTGGCCAGTCGCCGGCCATGCAGCATTTGCGACGGCAAATCCGCAAACTGGCACGCAGCCAGGCGCCA
ATCTACATCAGCGGCGAATCCGGCAGCGGCAAGGAAAAAGTGGCGCGTCTGATTCACACGCTGGGGCCGCGCGGTGACCA
CCCTTTCGTTGCGGTGAACTGCGGCGCCATCCCTTCCGAACTGATGGAAAGTGAATTTTTCGGTCACCGCAAAGGCAGTT
TCACCGGCGCCGTGGAAGACCGCAAAGGCCTGTTCCGGGAAGCGGACGGAGGCACCCTGTTTCTTGATGAGGTAGCGGAT
CTGCCTCTGCACATGCAGGTCAAGCTTCTGCGTGCGATTCAGGAGAAAACCGTGCGGCCGGTGGGCGAGTCACGGGAGTT
CAGCGTCAACCTGCGTATTCTTTGCGCCACCCACAAGGATCTCAGCGAGGAAATGCAGGCGGGCCGCTTTCGTCAGGACC
TCTACTACCGGCTGAATGTCATCGAGGCACACGTGCCGCCGCTGCGCGAGCGCCTGGAGGACGTTCCGGCGCTGGTTGAG
CATATCCTCTCCCGGCTCGGCATCGCCTGGGATACCACGCCGCCCACACTCAGTAACGGTACTCTGGCGGCGCTGCGCGA
CTATCCGTTTCCCGGCAACGTGCGAGAGCTGGAAAACGTACTGGAGCGGGCCATGACCCTGTGTGATGGCAACGTTATCG
AACCGGCGCATCTGCGGCTACCCAGCCAGGCCAGCAGCGAAGCACCCAGCCAGGGCGGCAGCCGGGATCCGGCTTTGCCA
TTGGAGGATTATCTACAGGACATCGAGCGGCAGGAAATTCTCAAAGCGCTGGATGCCACCCACTGGAATCGCACCGCCGC
CGCCAAGAAGCTGGGTATGACGTTTCGCTCATTGCGTTACCGCTTGAAGAAACTGGCCCTGGATCAGGAAGAAGAGGAAG
GCAGCGCGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (137-302)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.883	97.807	0.605
pilR	Acinetobacter baumannii strain A118	49.356	100	0.504
luxO	Vibrio cholerae strain A1552	41.379	89.035	0.368