Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   PO908_RS10145 Genome accession   NZ_CP117042
Coordinates   1967316..1967462 (-) Length   48 a.a.
NCBI ID   WP_003026814.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1962316..1972462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS10135 (PO908_10100) comE 1965224..1965973 (-) 750 WP_022526721.1 competence system response regulator transcription factor ComE Regulator
  PO908_RS10140 (PO908_10105) comD/comD2 1965973..1967295 (-) 1323 WP_394467990.1 sensor histidine kinase Regulator
  PO908_RS10145 (PO908_10110) comC 1967316..1967462 (-) 147 WP_003026814.1 bacteriocin Regulator
  PO908_RS10155 (PO908_10120) rlmH 1967744..1968223 (-) 480 WP_041784074.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PO908_RS10160 (PO908_10125) htrA 1968417..1969607 (+) 1191 WP_021002247.1 S1C family serine protease Regulator
  PO908_RS10165 (PO908_10130) spo0J 1969662..1970429 (+) 768 WP_021002248.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5606.63 Da        Isoelectric Point: 10.1958

>NTDB_id=716477 PO908_RS10145 WP_003026814.1 1967316..1967462(-) (comC) [Streptococcus anginosus strain CGMH_KH1]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIVGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=716477 PO908_RS10145 WP_003026814.1 1967316..1967462(-) (comC) [Streptococcus anginosus strain CGMH_KH1]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCGTTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

48.649

77.083

0.375