Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   PO908_RS07815 Genome accession   NZ_CP117042
Coordinates   1501658..1503673 (-) Length   671 a.a.
NCBI ID   WP_021002009.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1496658..1508673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS07795 (PO908_07770) - 1497058..1498272 (-) 1215 WP_021002006.1 pyridoxal phosphate-dependent aminotransferase -
  PO908_RS07800 (PO908_07775) - 1498424..1498876 (+) 453 WP_020999785.1 universal stress protein -
  PO908_RS07805 (PO908_07780) - 1498922..1500310 (-) 1389 WP_021002007.1 Cof-type HAD-IIB family hydrolase -
  PO908_RS07810 (PO908_07785) - 1500375..1501337 (+) 963 WP_021002008.1 asparaginase -
  PO908_RS07815 (PO908_07790) recG/mmsA 1501658..1503673 (-) 2016 WP_021002009.1 ATP-dependent DNA helicase RecG Machinery gene
  PO908_RS07820 (PO908_07795) alr 1503778..1504884 (-) 1107 WP_041784037.1 alanine racemase -
  PO908_RS07825 (PO908_07800) acpS 1504871..1505236 (-) 366 WP_003026132.1 holo-ACP synthase -
  PO908_RS07830 (PO908_07805) - 1505341..1506381 (-) 1041 WP_021002012.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75536.38 Da        Isoelectric Point: 6.4637

>NTDB_id=716449 PO908_RS07815 WP_021002009.1 1501658..1503673(-) (recG/mmsA) [Streptococcus anginosus strain CGMH_KH1]
MNLHQPLTVLPGVGPKSAEKFSKLGIESLQDLLLYFPFRYEDFKSKNVIELEDGEKAVVSGVVVTPANVQYYGYKRNRLR
FTIKQDEVVLAINFFNQPYLADKVEVGSTIAIFGKWDKAKASLTGMKILAQVEDDLQPVYRVAQGISQASLVKVIKTAFD
QGLELLLEENLPQVLLERYQLLGRNQAVRAMHFPKNLTEYKQALRRIKFEELFYFQMQLQVLKHETKDVSQGLIIPWRAD
LLEKKKATLPFELTAAQERSLNEILQDMQAPTHMNRLLQGDVGSGKTVVAGLAMYATYTAGLQSALMVPTEILAEQHFDS
LSQLFPELRIILLTGGMKPTERRQALEAIEAGQVEMIVGTHALIQESVTYHQLGLVIIDEQHRFGVGQRRILREKGNNPD
VLMMTATPIPRTLAITAFGDMDVSVIDQMPAGRKPIITRWVKHEQLNVVLNWLEKELQRGAQVYVISPLIEESEALDLKN
AIALEEELKAYFGDKAQVALLHGKMKSEEKDTIMQDFKKGKIDILVSTTVIEVGVNVPNATVMLIMDADRFGLSQLHQLR
GRVGRGDKQSYAVLVANPKTESGKKRMKIMTETTNGFVLAEEDLKMRGSGEIFGTRQSGLPEFQVADIVEDYPILEEARK
VASQIVSTPDWRTNAGWHIVALHLEKQDYLD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=716449 PO908_RS07815 WP_021002009.1 1501658..1503673(-) (recG/mmsA) [Streptococcus anginosus strain CGMH_KH1]
ATGAATTTACACCAACCTTTAACGGTTCTGCCGGGTGTGGGACCGAAATCTGCTGAAAAGTTCAGTAAGCTGGGAATTGA
AAGCCTGCAGGATTTGCTGCTCTATTTTCCATTTCGCTATGAAGATTTTAAAAGTAAGAATGTGATAGAACTGGAAGATG
GTGAAAAGGCAGTTGTTTCAGGAGTTGTCGTTACGCCAGCTAATGTGCAATATTATGGCTATAAGCGCAATCGCCTGCGT
TTTACCATAAAACAGGATGAAGTGGTACTTGCAATCAACTTCTTTAACCAACCTTATCTAGCAGACAAGGTAGAGGTTGG
CTCAACCATTGCTATTTTCGGCAAATGGGATAAGGCAAAGGCTAGTTTGACTGGGATGAAAATTCTGGCGCAAGTAGAAG
ATGATTTGCAGCCAGTTTATCGAGTAGCTCAAGGGATTAGTCAAGCCAGTTTGGTCAAGGTCATTAAGACAGCCTTTGAC
CAGGGGTTGGAATTGCTCTTGGAGGAAAATTTGCCCCAAGTGTTGTTAGAACGCTATCAGTTGCTAGGACGGAATCAGGC
TGTGCGAGCCATGCATTTTCCAAAAAACTTAACAGAGTACAAACAAGCTTTGCGTCGGATCAAGTTTGAAGAGCTTTTTT
ACTTTCAAATGCAATTGCAAGTTCTCAAACATGAAACAAAAGATGTTAGTCAGGGCTTAATTATTCCTTGGCGGGCAGAT
TTGCTAGAAAAGAAAAAAGCTACTCTACCTTTTGAGTTAACGGCTGCTCAAGAGCGCAGTCTAAACGAGATTTTACAGGA
TATGCAAGCGCCCACTCACATGAATCGACTGTTGCAAGGAGATGTCGGCAGCGGAAAGACAGTGGTTGCAGGTTTAGCTA
TGTATGCTACTTATACAGCTGGTTTGCAGTCTGCTCTCATGGTGCCAACGGAAATCTTGGCAGAGCAGCACTTTGATAGC
TTGAGCCAACTTTTTCCTGAACTGCGGATAATTCTGTTGACAGGAGGAATGAAGCCGACAGAACGCAGACAAGCACTAGA
AGCGATTGAGGCTGGTCAGGTAGAAATGATTGTCGGTACTCATGCTTTGATTCAAGAAAGTGTGACATATCATCAGCTTG
GTCTGGTGATTATTGATGAACAGCACCGCTTTGGAGTGGGACAGAGACGAATTTTGCGGGAAAAAGGAAATAATCCTGAT
GTGCTCATGATGACTGCAACACCGATTCCGAGGACACTTGCGATCACTGCCTTTGGCGATATGGATGTGTCGGTTATTGA
TCAAATGCCAGCGGGGCGTAAGCCGATTATCACTCGCTGGGTCAAGCACGAGCAGCTGAATGTGGTTCTCAATTGGTTGG
AGAAAGAGCTGCAACGAGGTGCTCAGGTCTATGTCATCTCTCCTTTGATTGAGGAGTCGGAAGCGCTGGATCTGAAAAAT
GCTATTGCTTTGGAAGAGGAATTAAAGGCTTATTTCGGTGACAAAGCACAAGTAGCTCTGCTACATGGTAAAATGAAGAG
CGAAGAAAAAGATACTATTATGCAGGATTTTAAGAAAGGAAAAATTGACATTCTGGTTTCCACGACTGTTATTGAAGTCG
GTGTCAATGTCCCCAATGCTACGGTCATGCTAATCATGGATGCGGACCGATTTGGGCTCAGCCAGCTTCATCAGTTACGT
GGTCGAGTAGGACGTGGAGATAAACAGTCTTATGCGGTTCTCGTGGCTAATCCTAAGACAGAATCCGGCAAGAAACGTAT
GAAAATCATGACGGAAACGACTAACGGTTTCGTCTTGGCTGAGGAAGATTTGAAAATGCGTGGTTCTGGTGAAATCTTCG
GCACTCGTCAGTCCGGTTTGCCGGAATTTCAGGTGGCAGATATTGTAGAGGATTATCCAATTTTAGAGGAGGCCAGAAAA
GTCGCCAGTCAAATTGTGTCCACTCCTGATTGGCGAACGAATGCAGGCTGGCATATTGTGGCGCTTCATTTGGAAAAACA
AGATTATTTGGATTGA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(12-158)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-651)

DEAD/DEAH box helicase (DEAD)

(254-411)

Helicase conserved C-terminal domain (Helicase_C)

(447-566)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

78.39

100

0.784
  recG/mmsA Streptococcus pneumoniae R36A

78.39

100

0.784
  recG Bacillus subtilis subsp. subtilis str. 168

49.16

97.615

0.48
  recG Neisseria meningitidis strain C311

39.117

97.914

0.383