Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   URS_RS11315 Genome accession   NZ_AP018824
Coordinates   2413629..2414336 (-) Length   235 a.a.
NCBI ID   WP_004989690.1    Uniprot ID   A0A3F3L3W5
Organism   Acinetobacter ursingii strain M3     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2408629..2419336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  URS_RS11295 (URS_2342) - 2409760..2411079 (+) 1320 WP_004989707.1 adenylosuccinate synthase -
  URS_RS11300 (URS_2343) - 2411175..2411486 (+) 312 WP_004989705.1 hypothetical protein -
  URS_RS11305 (URS_2344) - 2411594..2412376 (+) 783 WP_104795006.1 M48 family metallopeptidase -
  URS_RS11310 (URS_2345) - 2412434..2413480 (-) 1047 WP_004989699.1 NADP(H)-dependent aldo-keto reductase -
  URS_RS11315 (URS_2346) crp 2413629..2414336 (-) 708 WP_004989690.1 cAMP-activated global transcriptional regulator CRP Regulator
  URS_RS11320 (URS_2347) - 2414486..2414908 (+) 423 WP_004989689.1 OsmC family protein -
  URS_RS11325 (URS_2348) - 2415004..2415438 (+) 435 WP_010588778.1 GNAT family N-acetyltransferase -
  URS_RS11330 (URS_2350) - 2415440..2416242 (-) 803 Protein_2189 peptidoglycan DD-metalloendopeptidase family protein -
  URS_RS11335 (URS_2351) clpB 2416552..2419131 (+) 2580 WP_004989684.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26495.10 Da        Isoelectric Point: 4.6785

>NTDB_id=71588 URS_RS11315 WP_004989690.1 2413629..2414336(-) (crp) [Acinetobacter ursingii strain M3]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFESNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEEKSLDDTDFDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=71588 URS_RS11315 WP_004989690.1 2413629..2414336(-) (crp) [Acinetobacter ursingii strain M3]
ATGACGTCAAACTTTTCACAACTCAGCACCGATGCTTTATCTCCAGGTCAACTACCAGAGTCAGTCAAGGCGCTTTTAAA
ACGTGCTCATATTAATCGCTATCCAAAACGCACGACGATTGTTGACGCAGGTACCGAATCAAAATCGCTTTATTTGATTT
TGAAAGGCTCCGTTTCAATTATTTTACGTGAAGATGATGAACGTGAAATCGTAGTTGCTTATTTAAATCCTGGGGACTTT
TTTGGGGAAATGGGTCTCTTTGAATCAAATCCACAGCGTACAGCAGAAGTTCGTACACGTGATGTCTGTGAAATTGCCGA
AATTTCATATGACAATTTCCACGAACTTAGTAAGCAATATCCAGATTTAAGCTACGCGGTATTTGCCCAATTGGTACGTC
GTCTGAAAAATACGACCCGTAAAGTCACAGATTTAGCATTTATTGATGTTTCTGGTCGTATTGCGCGTTGTCTCATCGAT
TTATCAGCTCAACCAGAAGCCATGATTTTACCGAACGGTCGTCAAATCCGTATTACGCGTCAGGAAATTGGACGTATCGT
AGGCTGCTCACGCGAAATGGTTGGCCGTGTTCTTAAGACACTTGAAGAACAAGGTATGATTGAAACTGATGGTAAAGCAA
TTCTCATTTTCGATGCATCATTAGAAGAGAAGTCTCTGGATGATACTGATTTTGATGACGAAGAATAG

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3F3L3W5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

94.468

100

0.945
  crp Vibrio cholerae strain A1552

48.293

87.234

0.421
  crp Haemophilus influenzae Rd KW20

48.718

82.979

0.404

Multiple sequence alignment