Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   M0P24_RS11385 Genome accession   NZ_CP116957
Coordinates   2222516..2225086 (-) Length   856 a.a.
NCBI ID   WP_013852331.1    Uniprot ID   F5X3U0
Organism   Streptococcus pasteurianus strain WUSP070     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2217516..2230086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS11355 (M0P24_11355) - 2218025..2218327 (-) 303 WP_230321699.1 hypothetical protein -
  M0P24_RS11360 (M0P24_11360) - 2218397..2218567 (-) 171 WP_231729898.1 hypothetical protein -
  M0P24_RS11365 (M0P24_11365) - 2218628..2218804 (-) 177 WP_230321700.1 hypothetical protein -
  M0P24_RS11370 (M0P24_11370) - 2218951..2219802 (+) 852 WP_013852329.1 helix-turn-helix domain-containing protein -
  M0P24_RS11375 (M0P24_11375) ruvA 2219882..2220475 (-) 594 WP_003066922.1 Holliday junction branch migration protein RuvA Machinery gene
  M0P24_RS11380 (M0P24_11380) hexB 2220477..2222399 (-) 1923 WP_111718472.1 DNA mismatch repair endonuclease MutL Machinery gene
  M0P24_RS11385 (M0P24_11385) hexA 2222516..2225086 (-) 2571 WP_013852331.1 DNA mismatch repair protein MutS Machinery gene
  M0P24_RS11390 (M0P24_11390) - 2225073..2225429 (-) 357 WP_003066927.1 YlbF family regulator -
  M0P24_RS11395 (M0P24_11395) argR 2225426..2225863 (-) 438 WP_003066930.1 arginine repressor -
  M0P24_RS11400 (M0P24_11400) argS 2226054..2227745 (+) 1692 WP_013852332.1 arginine--tRNA ligase -
  M0P24_RS11405 (M0P24_11405) - 2227857..2228150 (+) 294 WP_013852333.1 bacteriocin immunity protein -
  M0P24_RS11410 (M0P24_11410) - 2228192..2229697 (-) 1506 WP_013852334.1 prolyl oligopeptidase family serine peptidase -

Sequence


Protein


Download         Length: 856 a.a.        Molecular weight: 96080.51 Da        Isoelectric Point: 4.8579

>NTDB_id=715212 M0P24_RS11385 WP_013852331.1 2222516..2225086(-) (hexA) [Streptococcus pasteurianus strain WUSP070]
MTKDKISPGMQQYLDVKKDYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMAGVPYHSAQQYIDVLV
EMGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTAVDSSKPDNANNFLVAIDSDGKTFGLAYMDVSTGEFFSTSLSDFTS
LRSEILNLKAREIVVGYELSETEQHSLVKQLNLLLSFEQERYEDVHLIDPDLTALEISAAEKLLQYVHTTQKRELSHLQK
LVHYEIKDYLQMSYTTKSSLDLLENARTSKKHGSLYWLLDETKTAMGMRLLRNWIDRPLVNQAQIEERQNIVQVFLDNFF
ERSDLTDSLKGVYDIERLASRVSFGKANPKDLLQLGHTLAQVPRIKAILESFESPHLDKLVNSIDTLPELESLIRSAIDP
DAPAVITEGSIIRTGFDEILDKYRKVMREGTSWIAEVETKERAASGITNLKIDYNKKDGYYFHVTNSNLSLVPDYFFRKA
TLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRGQVERYITRLQDLAKALSSVDVLQSLAVVAENNHYVRPTFN
DSHEIKIEKGRHAVVEKVMGTQEYIPNTITFDADINIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVNLPVFDA
IFTRIGAADDLISGQSTFMVEMMEANQAIKRASSQSLILFDELGRGTATYDGMALAQSIIEYIHDHIGAKTMFATHYHEL
TALSTILTHLVNVHVATLEKNGDVTFLHKIAEGPADKSYGVHVAKIAGLPEELLQRADSILTNLESGAAQLQLTPEVEAE
PITIKSEVAEPVAEQLSLFADDSSNQEVIKVLKKVDLMNLTPMQAMNVIYELKNML

Nucleotide


Download         Length: 2571 bp        

>NTDB_id=715212 M0P24_RS11385 WP_013852331.1 2222516..2225086(-) (hexA) [Streptococcus pasteurianus strain WUSP070]
ATGACAAAAGATAAAATTTCTCCAGGCATGCAACAGTATTTGGACGTAAAAAAAGATTATCCAGATGCTTTTTTACTTTT
CCGCATGGGAGACTTTTATGAATTATTTTATGATGATGCGGTTAAAGCTGCACAAATTTTAGAGATTAGTTTAACTAGTC
GTAATAAAAATGCTGACAACCCAATTCCAATGGCAGGTGTGCCTTATCATTCTGCGCAACAATACATTGATGTATTAGTG
GAAATGGGTTACAAGGTGGCAATTGCTGAGCAAATGGAAGACCCAAAACAAGCCGTCGGTGTGGTTAAACGTGAAGTCGT
TCAAGTGATTACGCCAGGGACAGCTGTCGATTCCTCTAAACCAGATAATGCTAACAATTTCTTGGTGGCTATTGATTCTG
ACGGCAAAACGTTTGGGCTAGCCTATATGGACGTGTCAACAGGTGAATTTTTCTCAACAAGTCTTTCTGATTTTACAAGC
CTTAGAAGTGAAATTCTGAACCTTAAAGCGCGTGAAATCGTTGTTGGTTATGAGCTTTCTGAAACAGAGCAACATAGCTT
AGTCAAACAATTAAATTTACTCTTATCGTTTGAACAAGAACGTTATGAAGATGTGCATTTAATCGACCCAGATTTAACAG
CCTTAGAAATTTCAGCAGCTGAAAAATTGCTACAATACGTTCATACAACGCAAAAACGTGAGCTAAGCCATTTGCAAAAA
TTGGTTCATTATGAAATCAAAGATTACTTGCAAATGTCTTACACGACAAAATCTAGTTTGGATTTATTAGAAAATGCTCG
AACAAGTAAAAAACATGGTAGCCTTTATTGGTTACTAGATGAAACTAAAACGGCTATGGGAATGCGTCTGTTGCGTAATT
GGATTGACCGTCCTTTGGTGAACCAAGCACAGATTGAAGAGCGCCAAAATATTGTTCAAGTTTTCCTAGATAATTTCTTT
GAGCGTAGTGATTTGACGGATAGTCTCAAAGGTGTTTATGATATTGAACGTCTAGCGAGTCGTGTGTCATTTGGAAAAGC
TAATCCAAAAGATTTATTACAACTCGGTCATACCTTGGCACAAGTGCCAAGGATTAAGGCGATTTTAGAATCGTTTGAAA
GCCCTCACCTTGACAAGCTTGTCAATAGCATTGACACTTTGCCAGAACTAGAATCGTTGATTCGATCAGCTATTGACCCA
GATGCTCCTGCTGTTATCACAGAAGGCAGCATTATCCGTACAGGTTTTGATGAGATTTTGGATAAATACCGTAAGGTTAT
GCGCGAGGGGACTAGTTGGATTGCAGAAGTTGAAACTAAGGAACGTGCTGCAAGTGGGATTACCAATCTAAAAATTGATT
ATAATAAAAAAGATGGATACTATTTCCATGTAACAAATTCCAATCTCTCTCTAGTGCCAGATTATTTCTTCCGCAAGGCA
ACGTTGAAAAATTCAGAGCGTTTCGGAACGGCAGAATTGGCTAAAATTGAAGGTGAGATGTTGGAGGCGCGTGAGCAATC
AGCAAGCTTAGAATATGATATTTTTATGCGCGTTCGCGGACAAGTTGAGCGTTACATTACTCGTTTGCAAGACTTGGCTA
AGGCGCTTTCAAGCGTTGACGTTTTACAAAGTTTAGCCGTTGTTGCAGAAAATAATCATTATGTTCGTCCAACATTCAAC
GATAGCCATGAGATTAAAATTGAAAAAGGTCGTCATGCGGTCGTTGAAAAAGTCATGGGAACGCAAGAATATATTCCTAA
TACGATTACGTTTGATGCCGATATCAACATTCAGCTGATTACTGGTCCAAATATGAGTGGTAAATCAACTTATATGCGTC
AACTTGCCTTGACCGTTATTATGGCTCAAATGGGGTCTTACGTAGCTGCTGAAAGTGTCAATTTACCAGTATTTGATGCG
ATTTTCACGCGTATTGGTGCGGCAGATGATTTGATTTCAGGACAGTCAACGTTTATGGTGGAAATGATGGAAGCTAACCA
AGCTATCAAACGTGCAAGTTCTCAATCCTTGATTCTTTTTGATGAGCTAGGTCGTGGTACAGCAACCTATGACGGTATGG
CTTTGGCGCAATCAATCATTGAATATATCCATGATCATATTGGTGCAAAGACCATGTTTGCAACCCATTATCATGAGTTG
ACAGCTTTGTCAACGATCTTGACGCACCTTGTCAATGTTCACGTTGCGACTCTTGAGAAAAATGGTGATGTGACTTTTCT
TCATAAAATTGCAGAAGGTCCAGCAGACAAATCTTACGGGGTTCATGTTGCAAAAATTGCTGGTTTACCAGAAGAATTAT
TACAACGTGCGGACAGTATCTTGACAAATTTAGAATCAGGTGCTGCGCAGCTTCAATTGACCCCTGAGGTGGAAGCTGAG
CCAATTACTATAAAATCAGAAGTAGCAGAACCAGTGGCAGAGCAACTAAGTTTATTTGCTGATGACTCATCTAATCAAGA
AGTGATTAAAGTACTCAAAAAAGTTGATTTGATGAATTTAACACCAATGCAAGCCATGAATGTTATTTATGAATTAAAAA
ATATGTTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F5X3U0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

71.612

100

0.716

  mutS Pseudomonas stutzeri strain ATCC 17587

37.586

100

0.382