Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   M0P24_RS00940 Genome accession   NZ_CP116957
Coordinates   189135..191150 (+) Length   671 a.a.
NCBI ID   WP_013852214.1    Uniprot ID   F5X372
Organism   Streptococcus pasteurianus strain WUSP070     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 184135..196150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS00920 (M0P24_00920) - 185314..186345 (+) 1032 WP_003066311.1 3-deoxy-7-phosphoheptulonate synthase -
  M0P24_RS00925 (M0P24_00925) - 186349..187404 (+) 1056 WP_013852216.1 3-deoxy-7-phosphoheptulonate synthase -
  M0P24_RS00930 (M0P24_00930) acpS 187526..187885 (+) 360 WP_013852215.1 holo-ACP synthase -
  M0P24_RS00935 (M0P24_00935) alr 187942..189048 (+) 1107 WP_003066300.1 alanine racemase -
  M0P24_RS00940 (M0P24_00940) recG/mmsA 189135..191150 (+) 2016 WP_013852214.1 ATP-dependent DNA helicase RecG Machinery gene
  M0P24_RS00945 (M0P24_00945) - 191592..191942 (+) 351 WP_117575399.1 iron ABC transporter -
  M0P24_RS00950 (M0P24_00950) - 191993..192472 (+) 480 WP_003066288.1 DUF2975 domain-containing protein -
  M0P24_RS00955 (M0P24_00955) - 192485..192688 (+) 204 WP_003066286.1 helix-turn-helix domain-containing protein -
  M0P24_RS00960 (M0P24_00960) - 192753..193715 (-) 963 WP_248497713.1 asparaginase -
  M0P24_RS00965 (M0P24_00965) - 193786..195189 (+) 1404 WP_248497715.1 HAD-IIB family hydrolase -
  M0P24_RS00970 (M0P24_00970) - 195266..195718 (-) 453 WP_009854870.1 universal stress protein -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 74688.71 Da        Isoelectric Point: 6.0696

>NTDB_id=715117 M0P24_RS00940 WP_013852214.1 189135..191150(+) (recG/mmsA) [Streptococcus pasteurianus strain WUSP070]
MNLQSSIVELKGIGAKSAEKFYKLDIYTIEDLLLYYPFRYEDFKSKRVSELADGEKAVITGTVVTPANVQYYGYKRNRLS
FKIKQGEAVIAISFFNQPYLADKVELGSDIAIFGKWDALKSAVTGMKILAQVEDDMQPVYRVAQGISQNALVKAIKSAFE
IGAQNWLPENLPQVLLDKYRLLGRAQATAAMHFPKDLAEYKQALRRIKFEELFYFQMNLQVLKADNKSEANGLAIAYDEQ
KVADKIAALPFTLTGGQRRSLDDILADMRSGGHMNRLLQGDVGSGKTVVASLAMYATYTAGFQSALMVPTEILAEQHFES
LTQLFPDLSIAILTSGMKTAAKQAALSAIADGSVDMIVGTHALIQDAVTYHRLGLVITDEQHRFGVNQRRVFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSIIDELPAGRKPIITRWVKHEQLEVVLDWVKKELQKGAQAYVISPLIEESESLDLKN
AVALHEELSAYFADSATVALMHGRMKNDEKEAIMQDFKAQKSQVLVSTTVIEVGVNVSNATIMIIMDADRFGLSQLHQLR
GRVGRGDKQSYAILVANPKTQTGKERMKIMTETTDGFVLAEADLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEARR
VASQIVSEKDWQNNPQWQIVSQNLKDKGTFD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=715117 M0P24_RS00940 WP_013852214.1 189135..191150(+) (recG/mmsA) [Streptococcus pasteurianus strain WUSP070]
ATGAATTTACAATCATCAATTGTGGAATTAAAAGGAATAGGGGCTAAGTCGGCGGAAAAATTTTATAAGTTAGATATTTA
TACCATTGAAGATTTACTGCTGTACTATCCTTTTCGATATGAAGATTTTAAGAGCAAGCGTGTTTCAGAGCTTGCTGATG
GGGAAAAAGCTGTCATTACGGGAACGGTTGTGACACCTGCAAATGTGCAATATTATGGTTATAAGCGTAATCGTTTGTCG
TTTAAAATCAAGCAGGGCGAAGCGGTTATTGCGATTTCTTTTTTTAACCAGCCTTATTTAGCAGATAAAGTCGAGCTTGG
CAGCGATATCGCGATTTTTGGAAAATGGGATGCCCTAAAATCAGCGGTGACTGGTATGAAAATTTTAGCGCAAGTTGAAG
ATGATATGCAGCCAGTTTACCGTGTTGCTCAAGGTATTTCACAAAATGCACTAGTCAAAGCTATCAAATCAGCTTTTGAA
ATTGGTGCTCAGAATTGGTTGCCTGAAAATTTACCGCAGGTGCTTTTGGACAAGTATCGTTTGTTAGGGCGTGCTCAAGC
AACGGCTGCTATGCACTTTCCGAAAGATTTAGCAGAGTATAAACAAGCACTTCGTCGGATAAAATTTGAAGAACTGTTCT
ATTTCCAAATGAATTTGCAAGTTTTAAAGGCAGATAATAAATCAGAAGCTAATGGTTTGGCGATTGCTTATGATGAGCAA
AAAGTTGCTGATAAGATTGCAGCTCTGCCATTTACCTTGACGGGTGGGCAAAGGCGCAGTCTTGATGATATTTTGGCGGA
TATGCGTTCTGGTGGTCATATGAATCGTCTCTTGCAAGGGGACGTTGGTTCTGGTAAGACGGTTGTGGCTAGTCTTGCCA
TGTATGCTACTTATACGGCAGGTTTTCAATCAGCTTTGATGGTGCCAACGGAAATTTTGGCGGAGCAGCATTTTGAAAGT
TTGACCCAGCTTTTTCCAGATTTGTCCATTGCAATTTTAACATCAGGGATGAAAACAGCAGCCAAACAAGCGGCACTTTC
GGCGATTGCGGATGGTTCGGTAGATATGATTGTTGGTACGCATGCGCTGATTCAAGATGCGGTAACTTACCACCGCTTGG
GGCTTGTCATTACTGATGAACAACACCGTTTTGGTGTCAATCAACGTCGTGTTTTCCGTGAAAAGGGCGAAAATCCAGAT
GTGCTCATGATGACTGCAACACCAATTCCACGGACACTTGCTATTACGGCATTTGGTGAAATGGACGTTTCGATTATTGA
TGAATTGCCTGCAGGACGCAAACCGATTATCACGCGTTGGGTTAAACATGAACAGTTGGAAGTTGTGCTTGATTGGGTCA
AAAAAGAATTGCAAAAAGGGGCACAAGCCTATGTGATTTCACCTTTAATTGAAGAATCTGAATCACTTGATTTGAAAAAT
GCTGTTGCCTTGCACGAGGAATTGTCAGCCTATTTTGCGGATAGTGCAACCGTAGCGCTCATGCATGGTCGCATGAAAAA
TGACGAAAAAGAAGCTATCATGCAAGATTTCAAGGCACAAAAAAGTCAGGTTTTGGTATCGACAACCGTCATTGAAGTTG
GTGTTAATGTCTCAAATGCGACCATTATGATTATTATGGATGCTGACCGATTTGGGCTTAGCCAGTTGCATCAGCTTCGT
GGACGAGTTGGGCGTGGAGATAAACAATCTTATGCTATTTTAGTCGCCAATCCCAAAACACAAACAGGAAAAGAGCGCAT
GAAAATCATGACAGAAACAACGGATGGTTTTGTTTTAGCAGAAGCCGACCTTAAAATGCGTGGTTCAGGTGAGATTTTCG
GCACACGCCAATCAGGAATTCCAGAATTCCAAGTGGCAGATATTGTCGAAGATTACAATATTCTCGAGGAAGCTAGACGC
GTTGCAAGTCAGATCGTTTCCGAAAAAGATTGGCAAAACAATCCACAATGGCAAATTGTTAGCCAAAATCTCAAAGACAA
AGGAACTTTCGATTAA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(10-157)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)

DEAD/DEAH box helicase (DEAD)

(257-409)

Helicase conserved C-terminal domain (Helicase_C)

(450-566)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5X372

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

70.492

100

0.705
  recG/mmsA Streptococcus pneumoniae R36A

70.492

100

0.705
  recG Bacillus subtilis subsp. subtilis str. 168

49.331

100

0.495
  recG Neisseria meningitidis strain C311

38.947

99.106

0.386