Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   OSR41_RS17230 Genome accession   NZ_CP116941
Coordinates   3282774..3283655 (-) Length   293 a.a.
NCBI ID   WP_003184856.1    Uniprot ID   -
Organism   Bacillus licheniformis strain GN02     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3277774..3288655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSR41_RS17195 (OSR41_17195) - 3277983..3278459 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  OSR41_RS17200 (OSR41_17200) - 3278459..3278743 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  OSR41_RS17205 (OSR41_17205) mnhG 3278727..3279101 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  OSR41_RS17210 (OSR41_17210) - 3279141..3279530 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  OSR41_RS17215 (OSR41_17215) comA 3279547..3280185 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  OSR41_RS17220 (OSR41_17220) comP 3280272..3282578 (-) 2307 WP_272714603.1 ATP-binding protein Regulator
  OSR41_RS17225 (OSR41_17225) comX 3282601..3282765 (-) 165 WP_003184853.1 competence pheromone ComX -
  OSR41_RS17230 (OSR41_17230) comQ 3282774..3283655 (-) 882 WP_003184856.1 polyprenyl synthetase family protein Regulator
  OSR41_RS17235 (OSR41_17235) degQ 3283844..3283984 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  OSR41_RS17240 (OSR41_17240) - 3284470..3284817 (+) 348 WP_009329512.1 hypothetical protein -
  OSR41_RS17245 (OSR41_17245) - 3284860..3286080 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  OSR41_RS17250 (OSR41_17250) - 3286259..3287728 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  OSR41_RS17255 (OSR41_17255) - 3287746..3288297 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33459.20 Da        Isoelectric Point: 4.6798

>NTDB_id=714995 OSR41_RS17230 WP_003184856.1 3282774..3283655(-) (comQ) [Bacillus licheniformis strain GN02]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSNDSCFFNKMMEYILQSSQGQHDDLSDKPVTENECLDMIKRKSGSLTALSCVLGT
MLATGKFNPTVESYALQLGIALQIENDYRGLFYNSKSDIVKNKRTLAYLYLKRKFNQSSIDLLKVFENEDKIADIEIKCY
KEKLKEAGVPQYMYVMIQLAIQKFRRGIAELELKQEEKKWLASFLLNKFDKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=714995 OSR41_RS17230 WP_003184856.1 3282774..3283655(-) (comQ) [Bacillus licheniformis strain GN02]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
CGATTCTTGCTTTTTTAATAAAATGATGGAATACATATTGCAATCTTCACAAGGGCAACATGATGATCTTAGTGATAAGC
CGGTTACGGAAAACGAATGCCTTGATATGATCAAGCGCAAATCTGGTTCATTGACAGCTCTTTCATGTGTTTTGGGAACC
ATGCTCGCTACAGGTAAATTTAATCCTACTGTTGAATCTTATGCACTCCAATTGGGCATTGCTTTACAGATCGAAAATGA
TTATAGAGGTCTTTTCTATAATTCAAAAAGCGATATTGTGAAAAATAAGCGAACACTTGCTTATTTATACTTGAAAAGAA
AATTTAATCAATCCTCAATTGATTTATTAAAAGTATTTGAAAATGAGGATAAAATTGCCGATATAGAAATAAAATGTTAT
AAAGAAAAATTGAAGGAAGCTGGTGTTCCCCAATATATGTATGTCATGATTCAGCTTGCTATTCAGAAATTTAGAAGAGG
AATAGCTGAGTTAGAGCTGAAACAAGAGGAAAAGAAATGGCTTGCTTCTTTCCTTTTGAACAAGTTTGATAAGGAGGATT
AA

Domains


Predicted by InterProScan.

(41-230)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.637

98.635

0.44