Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NQZ91_RS00655 Genome accession   NZ_CP102145
Coordinates   130966..131769 (+) Length   267 a.a.
NCBI ID   WP_257117614.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 125966..136769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS00630 (NQZ91_00630) - 126104..126802 (-) 699 WP_125266253.1 amino acid ABC transporter permease -
  NQZ91_RS00635 (NQZ91_00635) - 127112..127951 (-) 840 WP_105110791.1 transporter substrate-binding domain-containing protein -
  NQZ91_RS00640 (NQZ91_00640) - 127961..128722 (-) 762 WP_257104598.1 amino acid ABC transporter ATP-binding protein -
  NQZ91_RS00645 (NQZ91_00645) micA 128914..129618 (+) 705 WP_105122701.1 response regulator YycF Regulator
  NQZ91_RS00650 (NQZ91_00650) micB 129611..130960 (+) 1350 WP_105122702.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NQZ91_RS00655 (NQZ91_00655) vicX 130966..131769 (+) 804 WP_257117614.1 MBL fold metallo-hydrolase Regulator
  NQZ91_RS00660 (NQZ91_00660) pbp2b 132095..134182 (+) 2088 WP_398599413.1 penicillin-binding protein PBP2B -
  NQZ91_RS00665 (NQZ91_00665) recR 134191..134787 (+) 597 WP_105128095.1 recombination mediator RecR -
  NQZ91_RS00670 (NQZ91_00670) - 134869..135915 (+) 1047 WP_257104594.1 D-alanine--D-alanine ligase -
  NQZ91_RS00675 (NQZ91_00675) - 136008..136388 (+) 381 WP_174852642.1 OsmC family protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29568.58 Da        Isoelectric Point: 5.7692

>NTDB_id=714925 NQZ91_RS00655 WP_257117614.1 130966..131769(+) (vicX) [Streptococcus suis strain DNS20]
MTEVSFKYSILASGSSGNCFYLETPKKRILVDAGLSGKKITSLLAEIDRKPDDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANEQTWQAMDGKLGKIDIAQKHIFELGVTKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIV
ANADGYLIESNHDIEILRAGSYSWNLKQRILSDKGHLCNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLVSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=714925 NQZ91_RS00655 WP_257117614.1 130966..131769(+) (vicX) [Streptococcus suis strain DNS20]
ATGACGGAAGTAAGTTTTAAATATAGTATTTTGGCGTCTGGCTCCAGCGGCAATTGTTTTTATTTGGAGACGCCTAAGAA
ACGAATTTTGGTGGATGCGGGGCTTTCTGGTAAGAAAATTACCAGTCTCTTGGCAGAAATCGACCGCAAGCCAGATGATA
TTGATGCCATTTTGGTGACCCATGAGCACAGCGACCATATCCATGGAATCGGTGTTCTGGCCCGCAAATACGGTATGGAC
ATTTATGCCAATGAGCAGACCTGGCAGGCCATGGACGGCAAGTTGGGCAAGATTGATATAGCACAAAAGCACATTTTTGA
ACTGGGGGTAACCAAGACCTTTGGTGACCTGGACATTGAGTCCTTCGGTGTTAGCCACGATGCGGCCTGTCCGCAGTTTT
ACCGTTTTATGAAGGATGATAAATCCTTTGTTATGCTGACGGATACGGGTTATGTCAGCGACCGGATGGCTGGGATTGTG
GCCAATGCAGATGGCTATTTGATTGAGTCCAATCATGATATTGAAATCCTGCGTGCGGGTTCTTATTCGTGGAATTTGAA
ACAGCGGATTTTGTCGGATAAGGGGCATCTCTGCAATGAAGATGGAGCAGATGCCATGATTCGGACCCTGGGTAATCGGA
CTAAGAAAATCTATCTTGGTCACTTGTCCAAGGAAAACAATATTAAAGAACTGGCCCACATGACCATGGTCAATCAGCTG
GCCCAGGCTGATTTGGGAGTAGGAGTGGATTTCCAAGTCTACGATACATCGCCCGATACGGCGACACCGCTGGTCTCCAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

79.401

100

0.794