Detailed information NTG0714774

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: NQZ94_RS00810
• Genome accession: NZ_CP102140
• Coordinates: 125408..125842 (+)
• Length: 144 a.a.
• NCBI ID: WP_009909097.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DNC49
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 120408..130842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ94_RS00775 (NQZ94_00775)	-	121150..121515 (+)	366	WP_002936568.1	DUF1033 family protein	-
NQZ94_RS00780 (NQZ94_00780)	-	121550..122500 (-)	951	WP_002936565.1	S66 peptidase family protein	-
NQZ94_RS00785 (NQZ94_00785)	comYA	122586..123536 (+)	951	WP_002936562.1	competence type IV pilus ATPase ComGA	Machinery gene
NQZ94_RS00790 (NQZ94_00790)	comYB	123448..124485 (+)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQZ94_RS00795 (NQZ94_00795)	comYC	124487..124768 (+)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
NQZ94_RS00800 (NQZ94_00800)	comGD	124749..125156 (+)	408	WP_009909093.1	competence type IV pilus minor pilin ComGD	-
NQZ94_RS00805 (NQZ94_00805)	comYE	125128..125421 (+)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQZ94_RS00810 (NQZ94_00810)	comGF/cglF	125408..125842 (+)	435	WP_009909097.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQZ94_RS00815 (NQZ94_00815)	comGG	125820..126230 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
NQZ94_RS00820 (NQZ94_00820)	comYH	126287..127240 (+)	954	WP_024409299.1	class I SAM-dependent methyltransferase	Machinery gene
NQZ94_RS00825 (NQZ94_00825)	-	127290..128477 (+)	1188	WP_013730078.1	acetate kinase	-
NQZ94_RS00830 (NQZ94_00830)	-	128792..129388 (+)	597	WP_009909104.1	folate family ECF transporter S component	-
NQZ94_RS00835 (NQZ94_00835)	-	129399..130655 (+)	1257	WP_013730079.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16449.77 Da
• Isoelectric Point: 5.9234

>NTDB_id=714774 NQZ94_RS00810 WP_009909097.1 125408..125842(+) (comGF/cglF) [Streptococcus suis strain DNC49]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=714774 NQZ94_RS00810 WP_009909097.1 125408..125842(+) (comGF/cglF) [Streptococcus suis strain DNC49]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae D39	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae R6	53.191	97.917	0.521
comGF/cglF	Streptococcus pneumoniae TIGR4	53.191	97.917	0.521
comYF	Streptococcus mutans UA140	50	100	0.5
comGF/cglF	Streptococcus mitis NCTC 12261	53.731	93.056	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	50.746	93.056	0.472
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458