Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   NQZ97_RS03900 Genome accession   NZ_CP102136
Coordinates   771519..772523 (+) Length   334 a.a.
NCBI ID   WP_002935813.1    Uniprot ID   A0A0K2E7G3
Organism   Streptococcus suis strain M105052_S26     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 766519..777523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS03875 (NQZ97_03875) - 767455..767934 (+) 480 WP_029173687.1 PTS sugar transporter subunit IIB -
  NQZ97_RS03880 (NQZ97_03880) - 767950..768735 (+) 786 WP_029173686.1 PTS sugar transporter subunit IIC -
  NQZ97_RS03885 (NQZ97_03885) - 768728..769546 (+) 819 WP_014636433.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  NQZ97_RS03890 (NQZ97_03890) - 769559..769975 (+) 417 WP_024382209.1 PTS sugar transporter subunit IIA -
  NQZ97_RS03895 (NQZ97_03895) - 770231..771310 (-) 1080 WP_125175859.1 Xaa-Pro peptidase family protein -
  NQZ97_RS03900 (NQZ97_03900) ccpA 771519..772523 (+) 1005 WP_002935813.1 catabolite control protein A Regulator
  NQZ97_RS03905 (NQZ97_03905) - 772936..774720 (-) 1785 WP_257110683.1 Spy0128 family protein -
  NQZ97_RS03910 (NQZ97_03910) - 775030..776028 (+) 999 WP_105104660.1 glycosyltransferase family 4 protein -
  NQZ97_RS03915 (NQZ97_03915) - 776029..777342 (+) 1314 WP_174850301.1 glycosyltransferase family 4 protein -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36772.94 Da        Isoelectric Point: 5.5173

>NTDB_id=714628 NQZ97_RS03900 WP_002935813.1 771519..772523(+) (ccpA) [Streptococcus suis strain M105052_S26]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=714628 NQZ97_RS03900 WP_002935813.1 771519..772523(+) (ccpA) [Streptococcus suis strain M105052_S26]
ATGTTAAACACTGATGATACGGTTACGATTTACGATGTCGCCCGTGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCAA
ATGCTGTTGCACGTGGATTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAATATTGCTAATGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTGAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGGCCACTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAATGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAGGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCGTCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATACGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0K2E7G3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

80.18

99.701

0.799

  ccpA Streptococcus gordonii str. Challis substr. CH1

79.58

99.701

0.793

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

59.215

99.102

0.587