Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/comEC   Type   Machinery gene
Locus tag   NQU59_RS16175 Genome accession   NZ_CP102099
Coordinates   3362288..3364714 (-) Length   808 a.a.
NCBI ID   WP_257064068.1    Uniprot ID   -
Organism   Acinetobacter colistiniresistens strain C-214     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 3344572..3365483 3362288..3364714 within 0


Gene organization within MGE regions


Location: 3344572..3365483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQU59_RS16060 (NQU59_16060) purM 3344572..3345642 (+) 1071 WP_005242726.1 phosphoribosylformylglycinamidine cyclo-ligase -
  NQU59_RS16065 (NQU59_16065) purN 3345639..3346268 (+) 630 WP_171057820.1 phosphoribosylglycinamide formyltransferase -
  NQU59_RS16070 (NQU59_16070) - 3346450..3346674 (+) 225 WP_257064053.1 hypothetical protein -
  NQU59_RS16075 (NQU59_16075) - 3346836..3347285 (-) 450 WP_257064054.1 lysozyme -
  NQU59_RS16080 (NQU59_16080) - 3347285..3347563 (-) 279 WP_065342414.1 holin -
  NQU59_RS16085 (NQU59_16085) - 3347623..3349026 (-) 1404 WP_257064055.1 hypothetical protein -
  NQU59_RS16090 (NQU59_16090) - 3349176..3349334 (-) 159 WP_004888418.1 hypothetical protein -
  NQU59_RS16095 (NQU59_16095) - 3349448..3349933 (-) 486 WP_257064056.1 hypothetical protein -
  NQU59_RS16100 (NQU59_16100) - 3349972..3351357 (-) 1386 WP_257064057.1 hypothetical protein -
  NQU59_RS16105 (NQU59_16105) - 3351367..3352011 (-) 645 WP_257064058.1 DNA transfer protein p32 -
  NQU59_RS16110 (NQU59_16110) - 3352015..3352458 (-) 444 WP_114166649.1 GNAT family N-acetyltransferase -
  NQU59_RS16115 (NQU59_16115) - 3352455..3352787 (-) 333 WP_257064059.1 hypothetical protein -
  NQU59_RS16120 (NQU59_16120) - 3352774..3353172 (-) 399 WP_257064060.1 hypothetical protein -
  NQU59_RS16125 (NQU59_16125) - 3353175..3354569 (-) 1395 WP_257064061.1 packaged DNA stabilization protein -
  NQU59_RS16130 (NQU59_16130) - 3354553..3355188 (-) 636 WP_130136036.1 hypothetical protein -
  NQU59_RS16135 (NQU59_16135) - 3355309..3356528 (+) 1220 WP_107114716.1 IS3 family transposase -
  NQU59_RS16140 (NQU59_16140) - 3356525..3356938 (-) 414 WP_257064062.1 hypothetical protein -
  NQU59_RS16145 (NQU59_16145) - 3356976..3357734 (-) 759 WP_257064063.1 P22 phage major capsid protein family protein -
  NQU59_RS16150 (NQU59_16150) - 3357902..3358153 (+) 252 WP_257064064.1 hypothetical protein -
  NQU59_RS16155 (NQU59_16155) - 3358128..3359078 (-) 951 WP_257064065.1 site-specific integrase -
  NQU59_RS16160 (NQU59_16160) - 3359244..3360035 (-) 792 WP_010589736.1 alpha/beta fold hydrolase -
  NQU59_RS16165 (NQU59_16165) sppA 3360170..3361192 (-) 1023 WP_005242732.1 signal peptide peptidase SppA -
  NQU59_RS16170 (NQU59_16170) - 3361330..3362286 (+) 957 WP_043972705.1 lysophospholipid acyltransferase family protein -
  NQU59_RS16175 (NQU59_16175) comA/comEC 3362288..3364714 (-) 2427 WP_257064068.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NQU59_RS16180 (NQU59_16180) lolD 3364800..3365483 (-) 684 WP_043972710.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -

Sequence

Protein


Download         Length: 808 a.a.        Molecular weight: 92584.59 Da        Isoelectric Point: 8.1692

>NTDB_id=714417 NQU59_RS16175 WP_257064068.1 3362288..3364714(-) (comA/comEC) [Acinetobacter colistiniresistens strain C-214]
MLKVILLSWIAGITLMGYHFSFAVRTWWVWLILAIVIFCIGLYQRSRYFQSVCYKSVLLISASWALFCTGFYYADSALEQ
RLSLREVEAQPFEAIVYIKKIDELTEEGRKQTAEVLNRHAQSVDWFLYLSQSNSLLAPQQNLQLGRYYRLEGMIKPAHSY
AVAGVFDQEKWFLQQNIMSAYQVRHMQLLTQDDIDRLGYQWHLKQQHTLQAKFLLNVEMLRLSFREMLQISAFQHKGLLL
ALLTGDESLLSNRLKQQFQQLGISHLLAISGPHVLIFALMLTWLLKCMIQRYAPTLYLWQPRQILLLLPFGLSVLLYVAF
VGFEIPALRTLFTVIIASVFLLFRQSIQPFTLLLYSASLLLIYDPFSILSAAFWLSYGACFILLRIYQTIEHFTQDQTLT
SVQKQILAINMVVESQWKIFIALLPLMLIFFQQISWSAPLSNLIAIPLLSTLIVPLDIIAACIWLVVPAFGLLLFQLNDG
LLSILMWILNHLQQLSPQLYGVSYTPLMLLSLTLGLVILFMPKATIPKLWAVICFLPMVLGVQTQPTVLNILDVGQGQAI
FLQHPQQTLMIDTGGLHDEAKFGIGERVDIPFLRQQGIRRLDHLILSHLDQDHSGAFPAIQNAFAITQVQSSERSEKFPF
KDNFSYCQQGQHWSYTDLEIEILSPTQEGLRIAQDQKNEQSCVVYLQFSNAQPYQNFLIMGDAGWETEYKLLKQYPDLKV
DVLVLGHHGSKNSSAYDFLAALKPKLAVASAGFDNRYGHPSQELQSRLLALKIPLLNTAQTGCLSFIFNKGAVELKQQRQ
QRRWLQRE

Nucleotide


Download         Length: 2427 bp        

>NTDB_id=714417 NQU59_RS16175 WP_257064068.1 3362288..3364714(-) (comA/comEC) [Acinetobacter colistiniresistens strain C-214]
ATGTTAAAAGTAATATTACTCAGCTGGATCGCTGGTATAACTTTGATGGGATATCATTTTAGCTTTGCTGTTCGCACTTG
GTGGGTTTGGCTAATTCTAGCGATCGTGATTTTCTGCATCGGTTTATATCAAAGATCTCGGTATTTTCAATCTGTTTGCT
ATAAGTCGGTACTGTTGATCAGTGCTAGCTGGGCTTTGTTTTGTACGGGCTTTTATTATGCGGATTCCGCCTTAGAGCAA
CGGCTAAGCTTAAGAGAAGTGGAGGCGCAGCCTTTTGAAGCCATTGTTTATATCAAGAAAATAGATGAGCTCACGGAGGA
GGGGCGTAAACAGACAGCAGAAGTGCTGAACCGACATGCTCAGTCTGTAGATTGGTTCCTGTATTTAAGTCAATCGAATA
GTCTGCTTGCTCCACAGCAAAACTTACAGTTAGGTCGTTATTATCGCCTTGAAGGTATGATCAAACCAGCCCATAGCTAT
GCTGTGGCAGGCGTATTCGATCAGGAAAAATGGTTTTTGCAACAAAATATCATGTCTGCATATCAGGTCAGGCATATGCA
GCTTTTAACTCAGGATGACATTGATCGTCTGGGTTACCAGTGGCACCTAAAGCAACAACATACACTGCAAGCAAAATTTC
TATTAAATGTTGAAATGCTGCGATTGTCATTTCGTGAAATGCTACAGATATCAGCTTTTCAACATAAAGGGTTGCTACTG
GCTTTGTTGACGGGTGATGAAAGTTTATTATCAAATCGTTTAAAGCAGCAATTTCAGCAGTTGGGCATTTCACACTTACT
GGCAATATCAGGCCCACATGTATTGATCTTTGCATTGATGTTGACTTGGTTATTGAAGTGCATGATACAGCGTTATGCTC
CAACATTATATTTATGGCAACCACGGCAGATTTTATTGCTTTTACCATTTGGGTTAAGTGTGTTGTTGTATGTGGCATTT
GTTGGTTTTGAAATTCCTGCTCTGAGAACCTTGTTCACTGTCATTATCGCCAGTGTTTTTCTATTGTTCCGACAGTCAAT
TCAACCTTTCACCCTATTGCTTTATAGTGCCAGCCTACTTCTTATTTATGATCCATTTAGTATTCTATCCGCAGCCTTTT
GGTTGTCTTATGGGGCTTGTTTTATTCTGCTGCGAATCTACCAAACCATTGAACACTTCACACAAGATCAGACCCTGACA
AGCGTACAAAAGCAAATCTTGGCCATTAATATGGTTGTTGAGTCGCAATGGAAAATTTTTATCGCTTTATTACCACTGAT
GCTTATCTTTTTTCAGCAAATTTCTTGGTCTGCGCCGCTCAGTAATTTAATCGCGATCCCATTACTCAGTACTTTAATCG
TACCACTAGATATTATTGCAGCCTGTATTTGGCTAGTAGTTCCTGCATTCGGGCTACTTTTGTTTCAGCTCAATGATGGA
TTGCTGTCAATATTAATGTGGATATTAAATCACTTACAGCAGCTATCTCCTCAACTCTATGGTGTTAGTTATACGCCTTT
GATGTTGCTGAGTTTGACATTGGGGTTAGTGATTTTATTTATGCCGAAAGCAACAATTCCCAAGTTATGGGCTGTTATTT
GCTTTTTACCAATGGTTTTGGGCGTACAGACTCAACCTACCGTATTGAATATTCTGGATGTTGGTCAGGGTCAAGCAATT
TTTTTACAGCATCCTCAACAGACACTCATGATTGATACGGGTGGTTTACATGACGAAGCGAAGTTTGGTATTGGTGAGCG
AGTTGATATTCCATTCTTAAGACAGCAAGGTATACGGAGGTTAGATCATTTAATTTTATCTCATCTTGATCAAGATCATA
GTGGCGCATTTCCAGCAATCCAAAATGCTTTTGCGATTACTCAAGTTCAGTCAAGTGAACGAAGTGAAAAGTTCCCGTTT
AAGGATAATTTCTCCTATTGCCAACAGGGTCAGCATTGGTCATATACCGATCTTGAAATTGAGATTTTGTCGCCTACGCA
AGAGGGGCTAAGGATTGCTCAAGATCAGAAAAATGAGCAGTCTTGCGTGGTTTATTTGCAATTCTCCAATGCTCAGCCGT
ATCAAAATTTTTTGATTATGGGAGATGCAGGATGGGAAACTGAGTATAAATTATTAAAACAATATCCTGATTTAAAAGTA
GATGTATTGGTGCTAGGACATCATGGCAGTAAAAATAGCTCAGCTTATGATTTTTTAGCAGCGCTCAAACCTAAACTGGC
AGTTGCGTCAGCTGGTTTTGATAATCGCTATGGTCATCCTAGTCAGGAGTTACAAAGTCGCTTGCTCGCTTTGAAAATTC
CATTGTTGAATACGGCACAGACAGGCTGTTTAAGTTTTATCTTTAACAAAGGTGCCGTTGAATTAAAACAACAACGGCAG
CAACGCAGGTGGCTGCAACGAGAATAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(553-632)

Competence protein (Competence)

(242-522)

Domain of unknown function (DUF4131) (DUF4131)

(27-178)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii strain A118

55.995

100

0.561
  comA/comEC Acinetobacter baumannii D1279779

55.871

100

0.559
  comA/comEC Acinetobacter baylyi ADP1

52.035

100

0.522