Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   NQU59_RS14695 Genome accession   NZ_CP102099
Coordinates   3056492..3057199 (+) Length   235 a.a.
NCBI ID   WP_004654102.1    Uniprot ID   N9PJZ4
Organism   Acinetobacter colistiniresistens strain C-214     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3051492..3062199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQU59_RS14675 (NQU59_14675) - 3051602..3052042 (-) 441 WP_005242048.1 hypothetical protein -
  NQU59_RS14680 (NQU59_14680) clpB 3052210..3054789 (-) 2580 WP_005242049.1 ATP-dependent chaperone ClpB -
  NQU59_RS14685 (NQU59_14685) - 3055053..3055853 (+) 801 WP_257063921.1 M23 family metallopeptidase -
  NQU59_RS14690 (NQU59_14690) - 3055921..3056343 (-) 423 WP_005242053.1 OsmC family protein -
  NQU59_RS14695 (NQU59_14695) crp 3056492..3057199 (+) 708 WP_004654102.1 cAMP-activated global transcriptional regulator CRP Regulator
  NQU59_RS14700 (NQU59_14700) - 3057398..3058177 (+) 780 WP_005242054.1 M48 family metallopeptidase -
  NQU59_RS14705 (NQU59_14705) - 3058231..3059109 (-) 879 WP_005242055.1 class I SAM-dependent methyltransferase -
  NQU59_RS14710 (NQU59_14710) - 3059205..3060725 (-) 1521 WP_257063922.1 NAD(P)/FAD-dependent oxidoreductase -
  NQU59_RS14715 (NQU59_14715) - 3060819..3061643 (-) 825 WP_005242057.1 SDR family oxidoreductase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26571.16 Da        Isoelectric Point: 4.7426

>NTDB_id=714415 NQU59_RS14695 WP_004654102.1 3056492..3057199(+) (crp) [Acinetobacter colistiniresistens strain C-214]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEKNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSAQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENTFSEDEYDDED

Nucleotide


Download         Length: 708 bp        

>NTDB_id=714415 NQU59_RS14695 WP_004654102.1 3056492..3057199(+) (crp) [Acinetobacter colistiniresistens strain C-214]
ATGACTTCAAATTTTTCACAACTTAGCACTGATGCTTTATCACCAGGCCAACTGCCTGAATCAGTAAAAGCTCTGCTAAA
ACGTGCTCATATTAATAGATACCCTAAACGCACCACGATTGTTGACGCTGGAACGGAATCAAAATCACTGTATTTAATAT
TAAAAGGTTCAGTGTCAATTATCTTACGTGAAGATGACGAACGAGAAATCGTTGTTGCTTACCTCAACCCTGGTGATTTC
TTTGGTGAAATGGGGCTTTTTGAAAAGAACCCTCAACGTACCGCAGAAGTACGTACACGAGATGTCTGCGAAATTGCAGA
AATTTCCTATGACAATTTCCATGAGTTAAGCAAGCAATACCCAGATTTGAGCTATGCAGTATTTGCCCAGCTGGTACGCC
GTCTTAAAAACACCACACGTAAAGTGACTGATCTGGCCTTCATTGATGTGTCAGGTCGTATCGCGCGTTGTTTAATTGAC
TTATCTGCACAGCCTGAGGCAATGATTTTGCCGAATGGCCGCCAGATTCGTATCACCCGCCAAGAGATTGGTCGAATTGT
CGGTTGTTCTCGTGAAATGGTTGGCCGTGTCCTCAAGACACTGGAAGATCAAGGCATGATCCAGACTGACGGTAAAGCCA
TCCTTATTTTTGATGCTTCTCTAGAAGAAAACACCTTCTCTGAAGATGAATATGATGATGAAGATTAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9PJZ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

94.468

100

0.945
  crp Vibrio cholerae strain A1552

47.573

87.66

0.417
  crp Haemophilus influenzae Rd KW20

49.231

82.979

0.409