Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   NQU59_RS00270 Genome accession   NZ_CP102099
Coordinates   54757..55182 (-) Length   141 a.a.
NCBI ID   WP_005239652.1    Uniprot ID   N9N919
Organism   Acinetobacter colistiniresistens strain C-214     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 49757..60182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQU59_RS00240 (NQU59_00240) - 49842..50111 (-) 270 WP_004655677.1 HPr family phosphocarrier protein -
  NQU59_RS00245 (NQU59_00245) rapZ 50108..50959 (-) 852 WP_005239648.1 RNase adapter RapZ -
  NQU59_RS00250 (NQU59_00250) panC 50979..51824 (-) 846 WP_005239649.1 pantoate--beta-alanine ligase -
  NQU59_RS00255 (NQU59_00255) panB 51828..52637 (-) 810 WP_004655682.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  NQU59_RS00260 (NQU59_00260) folK 52677..53165 (-) 489 WP_043971180.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  NQU59_RS00265 (NQU59_00265) pcnB 53162..54616 (-) 1455 WP_005239651.1 polynucleotide adenylyltransferase PcnB -
  NQU59_RS00270 (NQU59_00270) comEA 54757..55182 (-) 426 WP_005239652.1 ComEA family DNA-binding protein Machinery gene
  NQU59_RS00275 (NQU59_00275) mazG 55151..55957 (-) 807 WP_005239653.1 nucleoside triphosphate pyrophosphohydrolase -
  NQU59_RS00280 (NQU59_00280) - 56060..56833 (+) 774 WP_257064474.1 SDR family oxidoreductase -
  NQU59_RS00285 (NQU59_00285) - 56879..59185 (-) 2307 WP_005239655.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 16162.71 Da        Isoelectric Point: 10.6099

>NTDB_id=714374 NQU59_RS00270 WP_005239652.1 54757..55182(-) (comEA) [Acinetobacter colistiniresistens strain C-214]
MRLPQSRSKHKFFLLMILCLGCISHLKAQQFDQSYQQWKAQQQARDQQLARQADNNYYLSRPTQQLPKQISSSGNIQGDK
ISLNQANLQQLQMLNGVGEKKAQAIVEYRQKNGGFKTVDELMNIKGIGPKLLEKNKSKLML

Nucleotide


Download         Length: 426 bp        

>NTDB_id=714374 NQU59_RS00270 WP_005239652.1 54757..55182(-) (comEA) [Acinetobacter colistiniresistens strain C-214]
ATGAGATTGCCGCAATCACGCAGCAAACATAAGTTTTTTTTATTGATGATCTTGTGCCTGGGGTGTATATCACATCTCAA
GGCACAGCAGTTTGACCAATCTTATCAACAGTGGAAGGCACAGCAGCAGGCACGTGATCAGCAATTGGCAAGACAAGCCG
ATAATAATTACTATTTATCTCGTCCAACTCAGCAGCTTCCGAAGCAGATTTCATCATCGGGCAACATTCAGGGTGATAAA
ATTAGCTTAAATCAAGCCAACTTACAGCAACTACAAATGTTAAATGGTGTGGGCGAGAAAAAAGCCCAAGCCATTGTAGA
GTATCGTCAAAAAAATGGCGGCTTTAAAACCGTGGATGAGTTGATGAATATCAAAGGCATTGGGCCAAAATTACTTGAGA
AAAATAAGTCAAAGCTGATGCTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(79-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9N919

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

52.206

96.454

0.504
  comEA Acinetobacter baumannii D1279779

50.746

95.035

0.482
  comEA Acinetobacter baylyi ADP1

46.667

95.745

0.447