Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   NQD66_RS03955 Genome accession   NZ_CP101995
Coordinates   709968..710972 (+) Length   334 a.a.
NCBI ID   WP_001090621.1    Uniprot ID   A0A0E1EL27
Organism   Streptococcus agalactiae strain BCJB2983     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 704968..715972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQD66_RS03935 (NQD66_03930) - 705005..705844 (+) 840 Protein_692 SDR family oxidoreductase -
  NQD66_RS03940 (NQD66_03935) - 705997..706809 (+) 813 WP_000228638.1 HAD family hydrolase -
  NQD66_RS03945 (NQD66_03940) - 706825..708615 (+) 1791 WP_000149456.1 glycoside hydrolase family 3 protein -
  NQD66_RS03950 (NQD66_03945) - 708673..709758 (-) 1086 WP_000040811.1 Xaa-Pro peptidase family protein -
  NQD66_RS03955 (NQD66_03950) ccpA 709968..710972 (+) 1005 WP_001090621.1 catabolite control protein A Regulator
  NQD66_RS03960 (NQD66_03955) - 711104..712570 (+) 1467 WP_000180587.1 alpha-amylase -
  NQD66_RS03965 (NQD66_03960) - 712615..713613 (+) 999 WP_000866349.1 glycosyltransferase family 4 protein -
  NQD66_RS03970 (NQD66_03965) - 713615..714949 (+) 1335 WP_001219477.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36617.69 Da        Isoelectric Point: 5.7185

>NTDB_id=713959 NQD66_RS03955 WP_001090621.1 709968..710972(+) (ccpA) [Streptococcus agalactiae strain BCJB2983]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKAAAVDVIDILAGNHKDIAFVSGPLIDDINGKVRLAGYKEGLKKNGLNFKEGLVFEANYRYAEGFALAQRVINAG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPIAQYTRPNLTSISQPVYDLGAVSMRMLTKIMHKEELEEKEI
VLNHGIVKRGTTNN

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=713959 NQD66_RS03955 WP_001090621.1 709968..710972(+) (ccpA) [Streptococcus agalactiae strain BCJB2983]
ATGAATACAGATGATACGATTACGATTTATGATGTTGCCCGTGAAGCAGGTGTTTCGATGGCAACTGTTAGTCGTGTGGT
AAATGGAAATAAAAATGTCAAGGAAAATACACGTAAGAAAGTCCTTGAAGTTATTGATCGTCTTGACTATCGTCCAAATG
CTGTGGCGCGTGGTTTAGCAAGTAAAAAAACGACAACTGTTGGTGTTGTCATTCCTAATATCGCAAATAGCTACTTTTCA
ATTTTAGCGCGTGGTATTGATGATATTGCAGCAATGTACAAATATAACATTGTCCTTGCTTCAAGTGATGAAGACGATGA
TAAAGAGGTTAATGTTGTTAATACTTTGTTTGCTAAGCAAGTAGACGGTATTATTTTTATGGGACACCACTTAACTGAAA
AGATTCGTGCAGAGTTCTCTCGTTCACGCACACCGATTGTTTTAGCAGGTACTGTGGACCTTGAGCATCAATTACCAAGT
GTTAATATCGATTACAAAGCAGCAGCAGTTGATGTTATTGATATTTTAGCTGGCAATCATAAAGACATTGCTTTTGTATC
AGGACCACTTATTGACGATATTAATGGCAAGGTTCGTTTGGCAGGATACAAAGAAGGTCTCAAGAAAAATGGCTTAAACT
TTAAAGAGGGGTTGGTTTTTGAAGCCAACTACCGTTATGCTGAAGGCTTTGCATTAGCTCAACGTGTGATTAATGCTGGA
GCAACAGCAGCATATGTTGCTGAGGATGAGTTAGCGGCAGGTTTGTTAAATGGTCTTTTTGAGGCAGGTAAACGTGTTCC
TGAAGATTTTGAAATTATCACAAGCAATGACTCGCCAATCGCACAATATACACGTCCTAACTTAACTTCTATCAGTCAAC
CGGTCTATGATTTGGGTGCTGTTAGCATGCGTATGCTAACAAAAATTATGCACAAAGAAGAGTTGGAAGAAAAAGAAATA
GTGCTTAATCACGGGATTGTTAAACGTGGCACAACAAATAATTAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(179-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E1EL27

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.916

99.401

0.784
  ccpA Streptococcus pneumoniae D39

77.108

99.401

0.766
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569