Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   NPS17_RS07170 Genome accession   NZ_CP101985
Coordinates   1564151..1565152 (-) Length   333 a.a.
NCBI ID   WP_002262797.1    Uniprot ID   A0AAX1K324
Organism   Streptococcus mutans strain COCC33-14R     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1559151..1570152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS17_RS10125 - 1559591..1559716 (-) 126 Protein_1381 MazG-like protein -
  NPS17_RS07150 (NPS17_07150) - 1559780..1560020 (-) 241 Protein_1382 hypothetical protein -
  NPS17_RS07155 (NPS17_07155) - 1560099..1561433 (-) 1335 WP_002271828.1 glycosyltransferase family 4 protein -
  NPS17_RS07160 (NPS17_07160) - 1561435..1562433 (-) 999 WP_002271827.1 glycosyltransferase -
  NPS17_RS07165 (NPS17_07165) - 1562543..1564003 (-) 1461 WP_258968851.1 alpha-amylase -
  NPS17_RS07170 (NPS17_07170) ccpA 1564151..1565152 (-) 1002 WP_002262797.1 catabolite control protein A Regulator
  NPS17_RS07175 (NPS17_07175) - 1565315..1566394 (+) 1080 WP_168742063.1 Xaa-Pro peptidase family protein -
  NPS17_RS07180 (NPS17_07180) - 1566510..1567091 (-) 582 WP_002262795.1 CDP-archaeol synthase -
  NPS17_RS07185 (NPS17_07185) - 1567218..1567728 (-) 511 Protein_1389 carbonic anhydrase -
  NPS17_RS07190 (NPS17_07190) - 1567717..1567932 (-) 216 Protein_1390 carbonic anhydrase family protein -
  NPS17_RS07195 (NPS17_07195) - 1568027..1568692 (+) 666 WP_082999465.1 NAD(P)H-dependent oxidoreductase -
  NPS17_RS07200 (NPS17_07200) - 1568728..1569120 (+) 393 WP_002271822.1 VOC family protein -
  NPS17_RS07205 (NPS17_07205) - 1569522..1570034 (-) 513 WP_002271821.1 PadR family transcriptional regulator -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36613.89 Da        Isoelectric Point: 6.8583

>NTDB_id=713587 NPS17_RS07170 WP_002262797.1 1564151..1565152(-) (ccpA) [Streptococcus mutans strain COCC33-14R]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=713587 NPS17_RS07170 WP_002262797.1 1564151..1565152(-) (ccpA) [Streptococcus mutans strain COCC33-14R]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAACATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556