Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PPM66_RS18870 Genome accession   NZ_CP116867
Coordinates   3617523..3618317 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis subsp. subtilis strain MGP008     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3612523..3623317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM66_RS18845 rocD 3612972..3614177 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  PPM66_RS18850 rocR 3614418..3615803 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  PPM66_RS18855 - 3615785..3615973 (-) 189 Protein_3658 ATP-binding protein -
  PPM66_RS18860 - 3616090..3616219 (-) 130 Protein_3659 hypothetical protein -
  PPM66_RS18865 htrA 3616239..3617441 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  PPM66_RS18870 vicX 3617523..3618317 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  PPM66_RS18875 walI 3618339..3619181 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  PPM66_RS18880 walH 3619168..3620535 (-) 1368 WP_064635423.1 WalRK two-component regulatory system regulator WalH -
  PPM66_RS18885 walK 3620525..3622360 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  PPM66_RS18890 walR 3622368..3623075 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=713466 PPM66_RS18870 WP_003242676.1 3617523..3618317(-) (vicX) [Bacillus subtilis subsp. subtilis strain MGP008]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=713466 PPM66_RS18870 WP_003242676.1 3617523..3618317(-) (vicX) [Bacillus subtilis subsp. subtilis strain MGP008]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53