Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NP433_RS16025 Genome accession   NZ_CP101930
Coordinates   3107412..3109712 (-) Length   766 a.a.
NCBI ID   WP_088300729.1    Uniprot ID   -
Organism   Bacillus subtilis strain BGSC 10A5     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3102412..3114712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP433_RS15985 (NP433_15985) mrpB 3102879..3103310 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  NP433_RS15990 (NP433_15990) mrpC 3103310..3103651 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  NP433_RS15995 (NP433_15995) mrpD 3103644..3105125 (+) 1482 WP_003244432.1 Na+/H+ antiporter subunit D -
  NP433_RS16000 (NP433_16000) mrpE 3105131..3105607 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  NP433_RS16005 (NP433_16005) mrpF 3105607..3105891 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  NP433_RS16010 (NP433_16010) mnhG 3105875..3106249 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  NP433_RS16015 (NP433_16015) yuxO 3106288..3106668 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  NP433_RS16020 (NP433_16020) comA 3106687..3107352 (-) 666 WP_256682951.1 two-component system response regulator ComA Regulator
  NP433_RS16025 (NP433_16025) comP 3107412..3109712 (-) 2301 WP_088300729.1 histidine kinase Regulator
  NP433_RS16030 (NP433_16030) comX 3109724..3109888 (-) 165 WP_015384519.1 competence pheromone ComX -
  NP433_RS16035 (NP433_16035) - 3109901..3110761 (-) 861 WP_064671628.1 polyprenyl synthetase family protein -
  NP433_RS16040 (NP433_16040) degQ 3110946..3111086 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NP433_RS16045 (NP433_16045) - 3111308..3111433 (+) 126 WP_003228793.1 hypothetical protein -
  NP433_RS16050 (NP433_16050) - 3111547..3111915 (+) 369 WP_014477834.1 hypothetical protein -
  NP433_RS16055 (NP433_16055) pdeH 3111891..3113120 (-) 1230 WP_128738183.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88544.65 Da        Isoelectric Point: 7.6650

>NTDB_id=713027 NP433_RS16025 WP_088300729.1 3107412..3109712(-) (comP) [Bacillus subtilis strain BGSC 10A5]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLTQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYEKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=713027 NP433_RS16025 WP_088300729.1 3107412..3109712(-) (comP) [Bacillus subtilis strain BGSC 10A5]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATCAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAATTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTGGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGTAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGTGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTTTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTTACGCAGTTGATTAGAGATTCAACTTCTTTGACCCAAGTATTTGAGGAACTGAAAACCACGAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCTAACCCCGTATGGCTCAAAAAACTCATGTATACGATC
GAGGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTAGGGTTT
GATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.653

100

0.59