Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NPS25_RS02175 Genome accession   NZ_CP101904
Coordinates   456409..457362 (+) Length   317 a.a.
NCBI ID   WP_256683716.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ba-0321     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 451409..462362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS02150 (NPS25_02150) - 451457..452890 (+) 1434 WP_015416810.1 HAMP domain-containing sensor histidine kinase -
  NPS25_RS02155 (NPS25_02155) rapC 453043..454191 (+) 1149 WP_033575082.1 Rap family tetratricopeptide repeat protein Regulator
  NPS25_RS02160 (NPS25_02160) phrC 454175..454294 (+) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NPS25_RS02165 (NPS25_02165) - 454441..454551 (-) 111 WP_370529518.1 YjcZ family sporulation protein -
  NPS25_RS02170 (NPS25_02170) - 454631..455995 (-) 1365 WP_033575080.1 aspartate kinase -
  NPS25_RS02175 (NPS25_02175) ceuB 456409..457362 (+) 954 WP_256683716.1 ABC transporter permease Machinery gene
  NPS25_RS02180 (NPS25_02180) - 457352..458299 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  NPS25_RS02185 (NPS25_02185) - 458293..459051 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  NPS25_RS02190 (NPS25_02190) - 459073..460017 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  NPS25_RS02195 (NPS25_02195) - 460059..461483 (-) 1425 WP_033575079.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=712553 NPS25_RS02175 WP_256683716.1 456409..457362(+) (ceuB) [Bacillus velezensis strain Ba-0321]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYELI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=712553 NPS25_RS02175 WP_256683716.1 456409..457362(+) (ceuB) [Bacillus velezensis strain Ba-0321]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTTCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGAGCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATATAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGGATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536