Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   NPS25_RS02160 Genome accession   NZ_CP101904
Coordinates   454175..454294 (+) Length   39 a.a.
NCBI ID   WP_033575081.1    Uniprot ID   -
Organism   Bacillus velezensis strain Ba-0321     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 449175..459294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS25_RS02145 (NPS25_02145) - 450787..451470 (+) 684 WP_007410267.1 response regulator transcription factor -
  NPS25_RS02150 (NPS25_02150) - 451457..452890 (+) 1434 WP_015416810.1 HAMP domain-containing sensor histidine kinase -
  NPS25_RS02155 (NPS25_02155) rapC 453043..454191 (+) 1149 WP_033575082.1 Rap family tetratricopeptide repeat protein Regulator
  NPS25_RS02160 (NPS25_02160) phrC 454175..454294 (+) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NPS25_RS02165 (NPS25_02165) - 454441..454551 (-) 111 WP_370529518.1 YjcZ family sporulation protein -
  NPS25_RS02170 (NPS25_02170) - 454631..455995 (-) 1365 WP_033575080.1 aspartate kinase -
  NPS25_RS02175 (NPS25_02175) ceuB 456409..457362 (+) 954 WP_256683716.1 ABC transporter permease Machinery gene
  NPS25_RS02180 (NPS25_02180) - 457352..458299 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  NPS25_RS02185 (NPS25_02185) - 458293..459051 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4214.93 Da        Isoelectric Point: 8.0284

>NTDB_id=712552 NPS25_RS02160 WP_033575081.1 454175..454294(+) (phrC) [Bacillus velezensis strain Ba-0321]
MKLKSKWFVICLAAAAIFTVTGAGQTDQADFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=712552 NPS25_RS02160 WP_033575081.1 454175..454294(+) (phrC) [Bacillus velezensis strain Ba-0321]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

72.5

100

0.744