Detailed information NTG0712551

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NPS25_RS02155
• Genome accession: NZ_CP101904
• Coordinates: 453043..454191 (+)
• Length: 382 a.a.
• NCBI ID: WP_033575082.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Ba-0321
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 448043..459191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPS25_RS02135 (NPS25_02135)	-	448783..449124 (-)	342	Protein_381	ATP-binding cassette domain-containing protein	-
NPS25_RS02140 (NPS25_02140)	-	449139..450575 (-)	1437	WP_033575084.1	ABC transporter permease	-
NPS25_RS02145 (NPS25_02145)	-	450787..451470 (+)	684	WP_007410267.1	response regulator transcription factor	-
NPS25_RS02150 (NPS25_02150)	-	451457..452890 (+)	1434	WP_015416810.1	HAMP domain-containing sensor histidine kinase	-
NPS25_RS02155 (NPS25_02155)	rapC	453043..454191 (+)	1149	WP_033575082.1	Rap family tetratricopeptide repeat protein	Regulator
NPS25_RS02160 (NPS25_02160)	phrC	454175..454294 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NPS25_RS02165 (NPS25_02165)	-	454441..454551 (-)	111	WP_370529518.1	YjcZ family sporulation protein	-
NPS25_RS02170 (NPS25_02170)	-	454631..455995 (-)	1365	WP_033575080.1	aspartate kinase	-
NPS25_RS02175 (NPS25_02175)	ceuB	456409..457362 (+)	954	WP_256683716.1	ABC transporter permease	Machinery gene
NPS25_RS02180 (NPS25_02180)	-	457352..458299 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
NPS25_RS02185 (NPS25_02185)	-	458293..459051 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45491.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=712551 NPS25_RS02155 WP_033575082.1 453043..454191(+) (rapC) [Bacillus velezensis strain Ba-0321]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISSCFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=712551 NPS25_RS02155 WP_033575082.1 453043..454191(+) (rapC) [Bacillus velezensis strain Ba-0321]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACTTTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCTCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568