Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NPA43_RS14310 Genome accession   NZ_CP101833
Coordinates   2786343..2788655 (-) Length   770 a.a.
NCBI ID   WP_256498986.1    Uniprot ID   -
Organism   Bacillus pumilus strain NDY-10     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2781343..2793655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA43_RS14270 (NPA43_14270) - 2781584..2782015 (+) 432 WP_099727092.1 Na(+)/H(+) antiporter subunit B -
  NPA43_RS14275 (NPA43_14275) - 2782015..2782356 (+) 342 WP_256498983.1 Na(+)/H(+) antiporter subunit C -
  NPA43_RS14280 (NPA43_14280) - 2782349..2783827 (+) 1479 WP_099727090.1 Na+/H+ antiporter subunit D -
  NPA43_RS14285 (NPA43_14285) - 2783834..2784313 (+) 480 WP_099727089.1 Na+/H+ antiporter subunit E -
  NPA43_RS14290 (NPA43_14290) - 2784310..2784594 (+) 285 WP_099727088.1 Na(+)/H(+) antiporter subunit F1 -
  NPA43_RS14295 (NPA43_14295) mnhG 2784578..2784952 (+) 375 WP_256499683.1 monovalent cation/H(+) antiporter subunit G -
  NPA43_RS14300 (NPA43_14300) - 2785208..2785597 (-) 390 WP_256498984.1 hotdog fold thioesterase -
  NPA43_RS14305 (NPA43_14305) comA 2785621..2786262 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  NPA43_RS14310 (NPA43_14310) comP 2786343..2788655 (-) 2313 WP_256498986.1 ATP-binding protein Regulator
  NPA43_RS14315 (NPA43_14315) comX 2788709..2788879 (-) 171 WP_099727085.1 competence pheromone ComX -
  NPA43_RS14320 (NPA43_14320) - 2788876..2789793 (-) 918 WP_099727084.1 polyprenyl synthetase family protein -
  NPA43_RS14325 (NPA43_14325) degQ 2789945..2790085 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NPA43_RS14330 (NPA43_14330) - 2790633..2790944 (+) 312 WP_230030804.1 inner spore coat protein -
  NPA43_RS14335 (NPA43_14335) - 2791067..2792293 (-) 1227 WP_230030881.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89554.97 Da        Isoelectric Point: 6.9256

>NTDB_id=712249 NPA43_RS14310 WP_256498986.1 2786343..2788655(-) (comP) [Bacillus pumilus strain NDY-10]
MKLTYTKLSVFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVEVEYLSLAYTSGLEEGDIILKINGESALNKDH
MINGELRNVQRIDIQRGNQIITLKNKTLIGQESLFVYLTPLILYSICLFCIFFIIRINKEAQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVIVFCLSSVFIFYIHFIYQYFKEFDLHITTQKTIRFLYSLPVMNLVIEAFVPIDSVIARYMPSLN
LVFFFASIIISFKVIINGMRKYKETEQGSVLKFFVMINIIAFFPFILLFAIPYVLFRIYVIDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSIFKFTQLIREASSLNQVLYHLKYTILEVLVVNKAFVLEVKADGQIDEIDESTDDSKLWKEYVDQFQDVLGEVGKI
IELDKGFMMKIGERGGHSFVICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEHSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAVSKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKANQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTKSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=712249 NPA43_RS14310 WP_256498986.1 2786343..2788655(-) (comP) [Bacillus pumilus strain NDY-10]
ATGAAGTTAACTTATACGAAACTATCTGTTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAGGTTGTCGAAGTTGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAGATCAATGGTGAATCTGCCCTCAACAAAGATCAT
ATGATCAATGGTGAGCTTAGAAATGTGCAAAGAATTGATATTCAAAGAGGCAATCAAATCATCACACTGAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTTTACTTAACTCCTCTTATACTTTATTCAATTTGTTTGTTTTGTATCTTCTTTA
TCATTAGAATTAACAAAGAAGCCCAACGAAAATCAGCATTTCTTTTAGTTTTATTCTTATTAACTATTTGTATCGGGTAT
CTTAGTGCAGGTACTTCAGGAATTGGCGATAGATTTAGCCATTATGTGATCGTATTTTGTTTATCCAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAATTTGATCTGCATATAACGACTCAAAAAACGATACGCTTTTTATATA
GTCTTCCAGTAATGAATCTGGTGATAGAGGCTTTTGTTCCTATTGATTCGGTGATAGCCAGATATATGCCAAGTTTAAAT
CTTGTATTCTTTTTCGCTTCTATAATCATTTCATTCAAAGTTATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGATCTGTTTTAAAGTTTTTTGTCATGATTAATATAATAGCATTCTTTCCATTTATATTGTTATTTGCAATCCCTTATG
TTTTGTTTCGTATTTATGTGATAGATCCATTTTTCTTGACTTCTTTTGTCCTACTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTATAATATGGACTTTTTGATTAGCAGACTTAGGTACTATGGCTTTCTAGCAATCACACCGAC
CATTTTTGTTGTAGTCACATTTTACATTCTGCAGAAACCAGAAGATCTGAAGTACACACTGAAGCTCGCACTAATCACCT
ATACACTCATGCTTGCTGTCTTCTATTTCAAAGAAATCCTAGATTTCCGCTTTCGTCTGAAGCGTTTTTCAGAGAAGCAT
AATTATCAGGACAGCATATTTAAATTTACGCAGCTCATTCGTGAGGCCTCGTCACTAAATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTGAATAAAGCCTTTGTGCTTGAGGTCAAGGCTGATGGACAAATTGATGAAATTG
ATGAGTCGACAGATGACAGCAAGCTATGGAAAGAGTATGTGGATCAATTTCAAGATGTTTTAGGTGAAGTAGGGAAAATT
ATTGAGCTTGATAAAGGATTTATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCAAATTT
ACAGACACCGAAGCTGACTCGTGATGAAATTTCTTGGCTGAAAACATTGGCATTTTACACAAGTGTCAGCTTAGAAAATG
TCGTCAAGATCGAAGAATTGATGGAGCATCTTGAAGATTTGAAACAGCGTGAAGCCAATCCCGCGTGGCTGAAAAAGATC
ATGTTTGCGATGGAAGAAAAGCAGCGCTCCGATTTAGCGAGGGATCTACATGATTCCGTGCTGCAGGATTTGATTTCGCT
GAAAAGGCAGTCAGAAATGTTTTTAACGAATTTCCAAAACGACCAATGCCCAACGTCTATTGAACATTCGCTCATTTCAT
GGAATGAACAAATGTCTAAGGTCATTCAAACCACGAGAGAAACATGTCATGAGCTTCGGCCGCAGCTGCTTTATGATTTA
GGTTTAGTGAAGGCGGTATCGAAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCACATTAGGCTGAATACGACACG
CTTTGATAAAGAGCTGGACATTGATATTGACTCCCAGCTCAATATTTACCGGATTGTTCAGGAGCTGTTATCCAATGCGT
TGAAGCACTCCAAAGCCAATCAAGTGTTAGTGATGCTCATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGACGAT
GGAGTAGGATTTGATGCAAGCCAGCTTGATCAGCACACAAAAAGCATGGGCTTATCGGGAATAAGAGAACGTGTCAAGGC
GTTAAATGGAAAGCTTCAAATTCACACAGCCCCCGAAAAAGGGCTCAAAGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.161

100

0.495