Detailed information NTG0711970

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NOX82_RS09680
• Genome accession: NZ_CP101752
• Coordinates: 2112390..2114597 (+)
• Length: 735 a.a.
• NCBI ID: WP_256515350.1
• Uniprot ID: -
• Organism: Pseudomonas citronellolis strain C12
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2107390..2119597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NOX82_RS09655 (NOX82_09655)	-	2107541..2108119 (-)	579	WP_074979876.1	PilZ domain-containing protein	-
NOX82_RS09660 (NOX82_09660)	-	2108255..2109508 (+)	1254	WP_253409998.1	lipoprotein-releasing ABC transporter permease subunit	-
NOX82_RS09665 (NOX82_09665)	lolD	2109501..2110184 (+)	684	WP_253390406.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
NOX82_RS09670 (NOX82_09670)	-	2110201..2111451 (+)	1251	WP_256514736.1	lipoprotein-releasing ABC transporter permease subunit	-
NOX82_RS09675 (NOX82_09675)	-	2111723..2112253 (-)	531	WP_256514737.1	DUF2062 domain-containing protein	-
NOX82_RS09680 (NOX82_09680)	comA	2112390..2114597 (+)	2208	WP_256515350.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NOX82_RS09685 (NOX82_09685)	exbB	2114670..2115305 (+)	636	WP_009621398.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
NOX82_RS09690 (NOX82_09690)	-	2115302..2115748 (+)	447	WP_074979867.1	biopolymer transporter ExbD	-
NOX82_RS09695 (NOX82_09695)	lpxK	2115748..2116746 (+)	999	WP_253390409.1	tetraacyldisaccharide 4'-kinase	-
NOX82_RS09700 (NOX82_09700)	-	2116787..2116972 (+)	186	WP_009621404.1	Trm112 family protein	-
NOX82_RS09705 (NOX82_09705)	kdsB	2116986..2117750 (+)	765	WP_253390410.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NOX82_RS09710 (NOX82_09710)	-	2117750..2118211 (+)	462	WP_116424866.1	low molecular weight protein-tyrosine-phosphatase	-
NOX82_RS09715 (NOX82_09715)	murB	2118208..2119227 (+)	1020	WP_253390411.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 78595.91 Da
• Isoelectric Point: 8.0347

>NTDB_id=711970 NOX82_RS09680 WP_256515350.1 2112390..2114597(+) (comA) [Pseudomonas citronellolis strain C12]
MMALACGLLLLRFLPQLPPLAALLPLVGMALLCLCRRHHAVALFLLGFAWACLFAHDSWEGRLAPELDGRTLWLEGQVAG
LPATADGIVRFELEDVQARLELPGRIRVSWYDGPEVRAGERWRLAVTLRRPHGLANDFGFDYEAWLAADGIGATGSVKDG
RRLAEAAGPMAWREAWKDRLLAVDARGRNAYLVALVLGDGSGLGREDWDMLQDTGTLHLMVISGSHISLLGGLLYALVAG
LARLGAWPARVPWLPCACAVALAGAWGYGWIAGLQVPALRACLMLSMVLLWRLHFRRQGVWLPLLGALLVVLLVDPLVSL
TPGFWLSFAAVALLVYGFAGRLGRGAGWLAWGRAQWLMALGLAPVLLALGLPLSPAGALANLIAVPCVELLVVPLALVGS
LLLWLPAVGEGLLWLAGGVLDVLLGLLGRLSAYSPAWHPMAPPAWSIALALFGALLCLAPAGLPLRPLGLALLLPMFWPH
SSAPPHGHAEVRVLDVGQGLSVLIRTRHHAWLYDAGPRRGDFDLGEVAVLPTLRGLGVERLDVLLLSHADNDHAGGARSV
AAAVPVTRIISGEPRRLPGSLPADPCGNETWLLDGVRFSTWQWPGATDSNGRSCVLHVEAGGESLLLTGDLPAAGEAAWL
ASHPGLGADWLLAGHHGSRSASSEAFVRQLAPRAALVSRSRHNAHGHPSSEVLQRFAEQGMKVHDVAREGALRLLLGQRG
TLRGVRENAGFWREK

Nucleotide

• Length: 2208 bp

>NTDB_id=711970 NOX82_RS09680 WP_256515350.1 2112390..2114597(+) (comA) [Pseudomonas citronellolis strain C12]
ATGATGGCGCTGGCCTGCGGCCTGTTGCTGCTGCGTTTCCTGCCCCAGCTGCCACCCCTGGCGGCCCTGCTGCCATTGGT
CGGAATGGCGCTGCTGTGTCTGTGTCGGCGACATCACGCGGTGGCGCTCTTCCTGCTCGGCTTCGCCTGGGCCTGCCTGT
TCGCCCATGACTCGTGGGAAGGGCGCCTGGCTCCCGAACTGGACGGGCGGACGCTGTGGCTGGAAGGGCAGGTTGCCGGC
CTGCCGGCTACCGCGGATGGCATCGTCCGCTTCGAGCTGGAGGACGTCCAGGCGCGCCTGGAACTGCCCGGGCGCATCCG
CGTGTCCTGGTATGACGGCCCGGAGGTGCGGGCCGGGGAGCGCTGGCGCCTGGCGGTCACCCTGCGTCGCCCCCATGGCC
TGGCCAACGACTTCGGTTTCGACTATGAAGCCTGGCTGGCGGCCGACGGCATAGGCGCCACCGGCAGCGTCAAGGATGGC
CGGCGCCTGGCCGAGGCCGCGGGTCCCATGGCCTGGCGCGAGGCCTGGAAGGACCGGCTGCTGGCCGTGGATGCCCGGGG
GCGTAACGCCTACCTGGTGGCCCTGGTCCTCGGCGACGGCAGTGGCCTGGGCCGGGAAGACTGGGACATGCTGCAGGACA
CCGGCACCCTGCACCTGATGGTGATCTCCGGCTCGCACATCTCCCTGCTGGGCGGCTTGCTCTACGCCCTGGTGGCGGGT
TTGGCGCGCCTGGGGGCCTGGCCGGCGCGCGTGCCCTGGCTGCCCTGCGCCTGTGCCGTTGCACTGGCTGGCGCCTGGGG
CTATGGCTGGATCGCCGGACTGCAGGTGCCGGCGCTGCGTGCCTGCCTGATGCTCAGCATGGTGCTGCTGTGGCGCCTGC
ACTTTCGTCGCCAGGGCGTATGGCTGCCGCTGCTCGGTGCTCTGCTGGTGGTGTTGTTGGTCGATCCGCTGGTCAGCCTG
ACGCCCGGCTTCTGGCTGTCCTTCGCCGCCGTGGCGCTGCTCGTCTACGGCTTCGCCGGGCGCCTGGGGCGCGGGGCCGG
CTGGCTGGCCTGGGGGCGTGCGCAGTGGCTCATGGCCCTCGGGCTGGCCCCGGTGTTGCTGGCCTTGGGCCTGCCGCTGA
GTCCCGCCGGCGCGCTGGCGAACCTGATCGCGGTGCCCTGTGTCGAGTTGCTGGTGGTGCCCCTGGCGCTGGTCGGCAGC
CTGCTGCTGTGGCTGCCGGCGGTGGGCGAGGGGCTGCTATGGCTGGCCGGTGGCGTGCTCGATGTTCTGCTGGGCCTGCT
CGGGCGCCTGTCGGCGTACTCGCCGGCCTGGCACCCCATGGCGCCGCCGGCCTGGAGCATCGCCCTGGCCCTGTTCGGCG
CGCTGCTGTGCCTGGCGCCGGCCGGGCTGCCGCTGCGTCCGCTGGGCCTGGCGTTGCTGTTGCCGATGTTCTGGCCGCAT
TCCAGTGCGCCGCCCCACGGTCATGCCGAAGTGCGGGTGCTGGACGTGGGCCAGGGGCTGTCCGTGCTGATCCGCACCCG
TCATCACGCCTGGCTGTACGATGCCGGACCGCGCCGAGGTGATTTCGACCTCGGCGAGGTGGCGGTGCTGCCGACCCTCC
GTGGCCTGGGCGTCGAACGCCTGGACGTGCTGCTGCTCAGCCATGCCGACAACGACCACGCCGGCGGTGCCCGCTCGGTG
GCGGCGGCCGTGCCGGTGACGCGAATCATCAGCGGCGAACCCCGGCGTCTGCCGGGCAGCCTGCCTGCCGACCCCTGCGG
CAACGAGACATGGCTGCTGGACGGCGTGCGCTTTTCCACCTGGCAGTGGCCCGGCGCGACGGACAGTAACGGCCGCTCCT
GCGTGCTGCACGTCGAGGCCGGCGGCGAGAGCCTGCTGCTCACCGGCGACCTGCCGGCCGCAGGCGAGGCCGCCTGGCTG
GCCAGCCATCCAGGGCTTGGCGCCGACTGGTTGCTGGCCGGCCACCATGGCAGCCGCAGCGCCTCTTCCGAGGCCTTCGT
CAGGCAACTGGCGCCCCGAGCGGCGCTGGTTTCCCGCTCGCGCCACAACGCCCATGGCCATCCGTCCAGCGAGGTGCTGC
AACGCTTTGCCGAGCAGGGGATGAAGGTGCACGATGTGGCCCGGGAGGGCGCCCTGCGCCTGCTCCTGGGCCAGCGTGGA
ACGCTGCGCGGCGTGCGCGAAAATGCCGGATTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (16-162)

• Competence protein (Competence) (195-458)

• Metallo-beta-lactamase superfamily (Lactamase_B) (495-677)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	57.361	97.959	0.562
comA	Ralstonia pseudosolanacearum GMI1000	34.96	100	0.361