Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NPA28_RS16035 Genome accession   NZ_CP101718
Coordinates   3147380..3149689 (-) Length   769 a.a.
NCBI ID   WP_213417883.1    Uniprot ID   -
Organism   Bacillus halotolerans strain S-5     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3142380..3154689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPA28_RS15995 (NPA28_15995) - 3142848..3143279 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  NPA28_RS16000 (NPA28_16000) - 3143279..3143620 (+) 342 WP_256766350.1 Na(+)/H(+) antiporter subunit C -
  NPA28_RS16005 (NPA28_16005) - 3143613..3145094 (+) 1482 WP_106019476.1 Na+/H+ antiporter subunit D -
  NPA28_RS16010 (NPA28_16010) - 3145100..3145576 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  NPA28_RS16015 (NPA28_16015) - 3145576..3145860 (+) 285 WP_106019477.1 Na(+)/H(+) antiporter subunit F1 -
  NPA28_RS16020 (NPA28_16020) mnhG 3145844..3146218 (+) 375 WP_024122678.1 monovalent cation/H(+) antiporter subunit G -
  NPA28_RS16025 (NPA28_16025) - 3146257..3146637 (-) 381 WP_044158943.1 hotdog fold thioesterase -
  NPA28_RS16030 (NPA28_16030) comA 3146655..3147299 (-) 645 WP_024122680.1 two-component system response regulator ComA Regulator
  NPA28_RS16035 (NPA28_16035) comP 3147380..3149689 (-) 2310 WP_213417883.1 two-component system sensor histidine kinase ComP Regulator
  NPA28_RS16040 (NPA28_16040) comX 3149705..3149872 (-) 168 WP_044158946.1 competence pheromone ComX Regulator
  NPA28_RS16045 (NPA28_16045) comQ 3149856..3150761 (-) 906 WP_044160315.1 polyprenyl synthetase family protein Regulator
  NPA28_RS16050 (NPA28_16050) degQ 3150946..3151086 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  NPA28_RS16055 (NPA28_16055) - 3151547..3151915 (+) 369 WP_044158947.1 hypothetical protein -
  NPA28_RS16060 (NPA28_16060) - 3151891..3153120 (-) 1230 WP_044158949.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89343.94 Da        Isoelectric Point: 8.3598

>NTDB_id=711783 NPA28_RS16035 WP_213417883.1 3147380..3149689(-) (comP) [Bacillus halotolerans strain S-5]
MKNLIKKFTLTVIVMSVLYVCYITYISMNGIIIGTKVQKNHKNQFVIEEISESSYGQFVGLRTGDIILKINEEKPSEKHL
KWGYLSHINSLDILRYGKKIHLEDFDLVTLNRTYSFFLFVLPLVFYFLSIICIFYILKVSKVRKSFAGYILVLLLLDISV
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLKEIGKTFLKRISVLYIIPIFNIGIEFYRAYLQVDIDFLATVN
LVSFAALTLFAFVSIYFHLNKHKYAEHSFIIKLLILTNTLSFAPFLIFYVLPIILTGNYIFPALVSASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYTLLAIIPTLITVGALVWFDLVEIQMNPARQTVFIFVVMFSVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRSVTSLQQVFKELKNTILDVLLVSKAYTFEIAPDHKVIYLDKQVKEPDWQLYEKEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMQIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDG
VGFDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=711783 NPA28_RS16035 WP_213417883.1 3147380..3149689(-) (comP) [Bacillus halotolerans strain S-5]
TTGAAGAACTTAATAAAAAAATTCACATTAACTGTAATTGTTATGAGTGTTCTCTATGTATGCTACATAACATATATCAG
TATGAATGGTATTATAATTGGCACTAAGGTTCAAAAAAATCATAAAAATCAATTTGTAATAGAAGAAATATCAGAGTCTT
CGTATGGACAATTTGTTGGTCTCAGAACGGGAGATATCATATTAAAAATTAATGAAGAAAAACCATCTGAAAAGCATTTG
AAATGGGGATATTTGAGCCATATTAACAGTTTGGATATTTTAAGATATGGAAAAAAGATTCATCTTGAAGATTTTGATTT
AGTTACTTTAAATAGAACTTATAGTTTCTTTTTGTTCGTACTCCCCTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAGGTAAGTAAAGTAAGAAAGTCATTTGCTGGTTATATTCTTGTTTTGCTGTTATTAGACATTTCAGTA
GCTTATATAAGTGCAGGTGGACCATTTAGAGGACATAGAATTAATAGGTATATAAACTTGTTTACTTTTATATCCTCTCC
TATTCTTTATCTTCAATTTATACAAGGATATCTTAAAGAGATAGGAAAAACTTTTTTGAAAAGAATCTCGGTTCTCTATA
TAATCCCCATATTTAACATAGGGATTGAGTTTTATCGCGCCTATCTTCAAGTTGATATTGATTTTCTGGCGACTGTTAAT
TTGGTTTCATTTGCGGCTTTAACTTTATTTGCTTTTGTATCGATATACTTCCATCTAAATAAACATAAATATGCTGAGCA
TTCGTTTATTATTAAATTATTAATTTTAACAAATACACTATCATTTGCGCCATTTTTAATATTTTATGTTCTTCCGATAA
TACTTACAGGTAACTATATTTTCCCTGCATTAGTTTCAGCGTCGTTGCTTGTACTTATTCCTTTCGGTTTAGTGTATCAG
TTTGTGGCCAATAAAATGTTTGATATAGAATTTATTTTAGGAAGGATGAGATATTATACTCTCCTTGCTATCATACCTAC
TCTAATTACAGTTGGAGCATTAGTTTGGTTTGATCTAGTGGAAATACAAATGAATCCTGCACGCCAAACTGTATTTATTT
TTGTTGTCATGTTCTCTGTCTTTTATTTCAAAGAGGTCATAGATTTTAAATTTCGATTGAAACGGTTTTCTGAAAAATTT
AACTATCAGGACAGTATTTTTAAATACACTCAGCTAATGAGAAGCGTAACTTCCCTTCAACAAGTCTTTAAAGAATTGAA
AAATACTATTTTGGATGTCCTGCTTGTAAGCAAGGCATATACCTTCGAAATTGCTCCTGATCACAAAGTGATATATCTAG
ATAAGCAAGTCAAGGAACCAGATTGGCAACTATATGAAAAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAGATTATC
GAAGTTAATCAGGGTTTTCTCATGAAAGTTGGTGAACGGGGCGGAAGTTCTTATGTCCTGCTTTGTTTGTCTAATATTAA
TACTCCCAGACTGACACGTGATGAAATATCATGGCTGAAGACACTTTCTTTTTACACGAGCGTGTCAATGGAAAATGTCA
TGCAGATTGAAGAACTCATGGAACATTTAAAGGATTTAAAACAAGAAGGGACAAACCCTATTTGGCTGAAAAAGCTGATG
TTTGCAATTGAAGAGAAACAACGGTCAGGCCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCATTAAA
ACGGCAGTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTGC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGAGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGAT
TTGGGACTGGTGAAGGCGCTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGG
CAGATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAATGCAGTGA
AACACTCTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGACGATGGT
GTCGGATTTGATCTGGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTT
AGATGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

89.987

100

0.9