Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | NPA28_RS02165 | Genome accession | NZ_CP101718 |
| Coordinates | 426282..427430 (+) | Length | 382 a.a. |
| NCBI ID | WP_024120212.1 | Uniprot ID | A0A7G7UCE4 |
| Organism | Bacillus halotolerans strain S-5 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 421282..432430
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPA28_RS02145 (NPA28_02145) | - | 421653..422333 (-) | 681 | WP_044161887.1 | ABC transporter ATP-binding protein | - |
| NPA28_RS02150 (NPA28_02150) | - | 422349..423803 (-) | 1455 | WP_217828137.1 | ABC transporter permease | - |
| NPA28_RS02155 (NPA28_02155) | yclJ | 424016..424699 (+) | 684 | WP_024120210.1 | two-component system response regulator YclJ | - |
| NPA28_RS02160 (NPA28_02160) | - | 424686..426095 (+) | 1410 | WP_082687805.1 | HAMP domain-containing sensor histidine kinase | - |
| NPA28_RS02165 (NPA28_02165) | rapC | 426282..427430 (+) | 1149 | WP_024120212.1 | response regulator aspartate phosphatase RapC | Regulator |
| NPA28_RS02170 (NPA28_02170) | phrC | 427414..427536 (+) | 123 | WP_010333023.1 | PhrC/PhrF family phosphatase-inhibitory pheromone | Regulator |
| NPA28_RS02175 (NPA28_02175) | - | 427641..427733 (-) | 93 | WP_024120214.1 | YjcZ family sporulation protein | - |
| NPA28_RS02180 (NPA28_02180) | - | 427880..427990 (-) | 111 | WP_024120215.1 | YjcZ family sporulation protein | - |
| NPA28_RS02185 (NPA28_02185) | - | 428143..429507 (-) | 1365 | WP_069487496.1 | aspartate kinase | - |
| NPA28_RS02190 (NPA28_02190) | ceuB | 429893..430843 (+) | 951 | WP_099043690.1 | petrobactin ABC transporter permease YclN | Machinery gene |
| NPA28_RS02195 (NPA28_02195) | yclO | 430836..431783 (+) | 948 | WP_227534189.1 | petrobactin ABC transporter permease YclO | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 45690.75 Da Isoelectric Point: 5.2483
>NTDB_id=711728 NPA28_RS02165 WP_024120212.1 426282..427430(+) (rapC) [Bacillus halotolerans strain S-5]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVSDHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALEMAEAEQKAQLVGRAFYNLGLCYYNQDLLD
PAIEHFEKAVSTFENSRITNSLPQAYFLITLIYYKRGKHEKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQAQPNTEG
IERCFRYLKNKNMYADIEDLGLEVAKYYYEQKWFELSASYFLRVEEARKQIQRSEGLYEIEI
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVSDHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALEMAEAEQKAQLVGRAFYNLGLCYYNQDLLD
PAIEHFEKAVSTFENSRITNSLPQAYFLITLIYYKRGKHEKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQAQPNTEG
IERCFRYLKNKNMYADIEDLGLEVAKYYYEQKWFELSASYFLRVEEARKQIQRSEGLYEIEI
Nucleotide
Download Length: 1149 bp
>NTDB_id=711728 NPA28_RS02165 WP_024120212.1 426282..427430(+) (rapC) [Bacillus halotolerans strain S-5]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACCTTCAGCGT
GCCGGATGCCGAGGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGTTATATT
ACTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTCGAGCCGCTGGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCAGAATTATCACGAAATATAGACAGCAACCAAGCTGATCTGAAAGGGCTTCTCGATTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTACAAACAGGCGGAGAAAAAACTTTCCT
TTGTTTCCGATCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCATTGATTCATATCAAAAATGCATATGAAATTTATGTAGAGCAGGAAACCTATAATGTTCGGATTATCCAATGCCATTT
TGTGTTCGGGGTTAACCTCATGGATGAGAGAAATTTTGAACAAGCCGCACGGCATTTCAAATTGGCGCTGGAGATGGCGG
AAGCGGAACAAAAAGCCCAATTGGTCGGAAGAGCATTTTATAATTTAGGGCTGTGTTATTACAATCAAGACCTCCTCGAC
CCTGCCATTGAACATTTTGAGAAAGCGGTTTCCACTTTTGAAAACAGCAGAATCACCAATTCTCTGCCTCAAGCATATTT
TTTAATAACACTTATTTATTATAAACGCGGAAAACATGAGAAGGCCTCGGAATATCACAAGAGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTTGAGTTTTTACAATCCCTATATCAGGCACAGCCCAATACAGAAGGA
ATTGAACGATGTTTCCGATATTTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGGCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTTGAACTGTCTGCTTCCTACTTTCTTAGAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACCTTCAGCGT
GCCGGATGCCGAGGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGTTATATT
ACTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTCGAGCCGCTGGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCAGAATTATCACGAAATATAGACAGCAACCAAGCTGATCTGAAAGGGCTTCTCGATTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTACAAACAGGCGGAGAAAAAACTTTCCT
TTGTTTCCGATCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCATTGATTCATATCAAAAATGCATATGAAATTTATGTAGAGCAGGAAACCTATAATGTTCGGATTATCCAATGCCATTT
TGTGTTCGGGGTTAACCTCATGGATGAGAGAAATTTTGAACAAGCCGCACGGCATTTCAAATTGGCGCTGGAGATGGCGG
AAGCGGAACAAAAAGCCCAATTGGTCGGAAGAGCATTTTATAATTTAGGGCTGTGTTATTACAATCAAGACCTCCTCGAC
CCTGCCATTGAACATTTTGAGAAAGCGGTTTCCACTTTTGAAAACAGCAGAATCACCAATTCTCTGCCTCAAGCATATTT
TTTAATAACACTTATTTATTATAAACGCGGAAAACATGAGAAGGCCTCGGAATATCACAAGAGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTTGAGTTTTTACAATCCCTATATCAGGCACAGCCCAATACAGAAGGA
ATTGAACGATGTTTCCGATATTTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGGCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTTGAACTGTCTGCTTCCTACTTTCTTAGAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
95.026 |
100 |
0.95 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
56.316 |
99.476 |
0.56 |