Detailed information NTG0071080

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: K6J70_RS03625
• Genome accession: NZ_AP018774
• Coordinates: 714967..715659 (+)
• Length: 230 a.a.
• NCBI ID: WP_005686720.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-III-3 isolate 13H42
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 709967..720659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J70_RS03605 (CHBNIII3_06930)	ampD	711238..711798 (-)	561	WP_005648974.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
K6J70_RS03610 (CHBNIII3_06940)	pilA	711913..712362 (+)	450	WP_005686726.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
K6J70_RS03615 (CHBNIII3_06950)	pilB	712359..713756 (+)	1398	WP_011961745.1	GspE/PulE family protein	Machinery gene
K6J70_RS03620 (CHBNIII3_06960)	pilC	713753..714970 (+)	1218	WP_005686722.1	type II secretion system F family protein	Machinery gene
K6J70_RS03625 (CHBNIII3_06970)	pilD	714967..715659 (+)	693	WP_005686720.1	A24 family peptidase	Machinery gene
K6J70_RS03630 (CHBNIII3_06980)	rho	715713..716975 (-)	1263	WP_005648966.1	transcription termination factor Rho	-
K6J70_RS03635 (CHBNIII3_06990)	metJ	717223..717540 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
K6J70_RS03640 (CHBNIII3_07000)	cueR	717554..717940 (-)	387	WP_005654127.1	Cu(I)-responsive transcriptional regulator	-
K6J70_RS03645 (CHBNIII3_07010)	-	718017..718223 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
K6J70_RS03650 (CHBNIII3_07020)	-	718309..718515 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
K6J70_RS03655 (CHBNIII3_07030)	-	718601..718807 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
K6J70_RS03660 (CHBNIII3_07040)	-	718893..719099 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26677.71 Da
• Isoelectric Point: 8.8394

>NTDB_id=71080 K6J70_RS03625 WP_005686720.1 714967..715659(+) (pilD) [Haemophilus influenzae strain CHBN-III-3 isolate 13H42]
MIYFTMFLLGGIFGIALWFYLSGFITRLQQEIYATYIELFPQNFLPFQPSVSSIQQKKCGHILRYFLNVGVGFIFLQIAF
KDSIFAIWLGLTLLILWAISYLDWYYQLISTTPCLWLLTIGLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFLLLASVLGICFSLIHKKKKEFIPFAPFMNLSAVIIYFVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=71080 K6J70_RS03625 WP_005686720.1 714967..715659(+) (pilD) [Haemophilus influenzae strain CHBN-III-3 isolate 13H42]
ATGATTTACTTCACAATGTTTTTATTAGGCGGCATCTTCGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACCCG
TTTACAGCAAGAGATTTATGCGACTTATATTGAATTATTCCCACAAAACTTTCTGCCATTTCAGCCTAGCGTTTCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTAAATGTTGGGGTAGGATTTATATTTTTACAAATTGCTTTC
AAGGACTCTATTTTCGCTATATGGCTAGGGCTCACACTTCTTATCCTTTGGGCAATTAGTTATCTTGATTGGTACTATCA
ACTTATTTCTACTACACCCTGTTTATGGCTACTTACAATCGGTTTATTTGGGGCAGACAATAATTTTTCATTGCTTACGT
TATCTGAAAGTATAAAAAGTGCGGCAAGTTTTTTTATTGTTTTCTACGCAATCTATTGGATTGCAAAATTCTATTACGGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACTTTGCCGCACTT
TTTATTATTAGCCTCAGTTCTTGGAATATGTTTTTCGCTTATTCATAAAAAGAAAAAAGAATTTATACCTTTTGCCCCTT
TTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (92-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae 86-028NP	90.435	100	0.904
pilD	Haemophilus influenzae Rd KW20	90	100	0.9