Detailed information NTG0710318

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NM966_RS16995
• Genome accession: NZ_CP101506
• Coordinates: 3243337..3244512 (-)
• Length: 391 a.a.
• NCBI ID: WP_035389673.1
• Uniprot ID: A0AB39J225
• Organism: Bacillus altitudinis strain B12
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3238337..3249512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NM966_RS16965 (NM966_16910)	-	3238513..3238932 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NM966_RS16970 (NM966_16915)	-	3238989..3239711 (-)	723	WP_231947217.1	ComF family protein	-
NM966_RS16975 (NM966_16920)	-	3239672..3239965 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
NM966_RS16980 (NM966_16925)	comFA	3240030..3241157 (-)	1128	WP_046526682.1	DEAD/DEAH box helicase	Machinery gene
NM966_RS16985 (NM966_16930)	-	3241529..3242371 (-)	843	WP_060832692.1	DegV family protein	-
NM966_RS16990 (NM966_16935)	degU	3242583..3243272 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NM966_RS16995 (NM966_16940)	degS	3243337..3244512 (-)	1176	WP_035389673.1	sensor histidine kinase	Regulator
NM966_RS17000 (NM966_16945)	-	3244734..3245402 (+)	669	WP_017357860.1	YigZ family protein	-
NM966_RS17005 (NM966_16950)	-	3245387..3246484 (+)	1098	WP_007499958.1	LCP family protein	-
NM966_RS17010 (NM966_16955)	-	3246522..3247589 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
NM966_RS17015 (NM966_16960)	-	3247724..3248971 (-)	1248	WP_046344590.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45509.22 Da
• Isoelectric Point: 5.8757

>NTDB_id=710318 NM966_RS16995 WP_035389673.1 3243337..3244512(-) (degS) [Bacillus altitudinis strain B12]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFVMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=710318 NM966_RS16995 WP_035389673.1 3243337..3244512(-) (degS) [Bacillus altitudinis strain B12]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTGGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTGCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAGCTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGGCAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTTCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAACTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTAGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCGTCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841