Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   NM232_RS05920 Genome accession   NZ_CP101399
Coordinates   1044934..1047246 (-) Length   770 a.a.
NCBI ID   WP_035701206.1    Uniprot ID   A0AB39J089
Organism   Bacillus altitudinis strain HM-7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1039934..1052246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM232_RS05880 - 1040340..1040771 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  NM232_RS05885 - 1040771..1041112 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  NM232_RS05890 - 1041105..1042583 (+) 1479 WP_056702623.1 Na+/H+ antiporter subunit D -
  NM232_RS05895 - 1042590..1043069 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  NM232_RS05900 - 1043069..1043350 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  NM232_RS05905 mnhG 1043334..1043708 (+) 375 WP_035701201.1 monovalent cation/H(+) antiporter subunit G -
  NM232_RS05910 - 1043799..1044188 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  NM232_RS05915 comA 1044212..1044853 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  NM232_RS05920 comP 1044934..1047246 (-) 2313 WP_035701206.1 ATP-binding protein Regulator
  NM232_RS05925 comX 1047287..1047457 (-) 171 WP_074041927.1 competence pheromone ComX -
  NM232_RS05930 - 1047454..1048368 (-) 915 WP_065460972.1 polyprenyl synthetase family protein -
  NM232_RS05935 degQ 1048520..1048660 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NM232_RS05940 - 1049166..1049519 (+) 354 WP_058213658.1 hypothetical protein -
  NM232_RS05945 - 1049556..1050782 (-) 1227 WP_058213657.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 770 a.a.        Molecular weight: 89674.24 Da        Isoelectric Point: 7.1527

>NTDB_id=709979 NM232_RS05920 WP_035701206.1 1044934..1047246(-) (comP) [Bacillus altitudinis strain HM-7]
MKITYTKLSAFFVFLSFLFVIYVSYIYVFDIFNGARVEENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGESANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEIQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVITFCLSSVFIFYIHFIYQYFKEFDLHITTRKTIYILYSLPITNLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMQKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFIAITPTILVVVTFYILQKPEDLKYTLKLAFITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKANGEMIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=709979 NM232_RS05920 WP_035701206.1 1044934..1047246(-) (comP) [Bacillus altitudinis strain HM-7]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTTGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTTGAGGAGAACAAGAATGGTCAAGCAGAAGTTGTCAAAGTCGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGAGAATCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTCGTATTAACAAAGAGATCCAACGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCGGGTATTGGTGATAGATTTAGCCATTATGTCATCACATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCGAAAAACAATTTATATTTTATATA
GTCTTCCTATAACTAATCTAGTAATAGAGCTGTTTGTTCCAATTGATTCGGCGATAGCCAGATACATGCCGAGTTTAAAT
CTTTTATTCTTTTTTGCTTCTATTATCATGTCATTCAAAGTCATTATTAATGGAATGCAGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTTTGTCCGTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTCTTAACTTCTTTTGTATTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTTAAATACTATGGATTTATTGCCATTACACCGAC
CATTTTAGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTAAAGTACACACTGAAGCTCGCATTCATCACAT
ATACACTCATGTTGGCTGTTTTCTATTTCAAAGAAATTTTAGATTTCCGTTTTCGTTTGAAACGTTTTTCAGAGAAGTAT
AATTACCAAGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTACTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTCGTTGTGAATAAAGCCTTTGTGCTAGAGGTGAAGGCTAATGGAGAAATGATTGAAATTG
ATGAATCAACAAATGATAGTAAGTTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGGAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGAGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACGCCGAAATTGACCCGCGATGAAATCTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATTGAAGAATTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTC
ATGTTCGCCATGGAAGAAAAGCAGCGTTCAGATTTAGCAAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACT
GAAGAGACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTG
GGGTTAGTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCG
CTTTGATAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGT
TGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGAT
GGAGTCGGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGC
TCTAAATGGAAAGCTTCAAATTCACACGGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-637)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(681-768)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.645

100

0.49