Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   H7680_RS10365 Genome accession   NZ_AP023394
Coordinates   57709..57807 (+) Length   32 a.a.
NCBI ID   WP_014611913.1    Uniprot ID   A0ABU0A8X6
Organism   Streptococcus dysgalactiae subsp. equisimilis strain 159     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 52709..62807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7680_RS00340 (SDSE159_00350) - 53770..55026 (+) 1257 WP_003055555.1 DUF4041 domain-containing protein -
  H7680_RS00345 (SDSE159_00360) - 55019..55228 (+) 210 WP_014611912.1 hypothetical protein -
  H7680_RS00350 (SDSE159_00370) purB 55277..56569 (+) 1293 WP_003056595.1 adenylosuccinate lyase -
  H7680_RS00355 (SDSE159_00380) comR 56711..57622 (+) 912 WP_003060893.1 XRE family transcriptional regulator Regulator
  H7680_RS10365 comS 57709..57807 (+) 99 WP_014611913.1 quorum-sensing system DWW-type pheromone Regulator
  H7680_RS00360 (SDSE159_00390) ruvB 57841..58839 (+) 999 WP_003059357.1 Holliday junction branch migration DNA helicase RuvB Machinery gene
  H7680_RS00365 (SDSE159_00400) - 58974..59405 (+) 432 WP_003059365.1 low molecular weight protein-tyrosine-phosphatase -
  H7680_RS00370 (SDSE159_00410) - 59434..59835 (+) 402 WP_003049089.1 MORN repeat-containing protein -
  H7680_RS00375 (SDSE159_00420) - 59832..61607 (+) 1776 WP_003059359.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3771.59 Da        Isoelectric Point: 10.4764

>NTDB_id=70995 H7680_RS10365 WP_014611913.1 57709..57807(+) (comS) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
MFKKIKPYLLLAAVVAFKVARAMNEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=70995 H7680_RS10365 WP_014611913.1 57709..57807(+) (comS) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
ATGTTTAAAAAAATCAAACCATATTTGTTATTAGCCGCAGTCGTTGCTTTCAAAGTTGCTCGTGCAATGAACGAATTTGA
TTGGTGGAACCTAGGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

84.375

100

0.844
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment