Detailed information NTG0070938

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: K6J57_RS03945
• Genome accession: NZ_AP018770
• Coordinates: 770540..771232 (+)
• Length: 230 a.a.
• NCBI ID: WP_014550482.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-7 isolate 13H35
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 765540..776232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J57_RS03925 (CHBNII7_07510)	ampD	766814..767374 (-)	561	WP_042599472.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
K6J57_RS03930 (CHBNII7_07520)	pilA	767489..767938 (+)	450	WP_042593498.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
K6J57_RS03935 (CHBNII7_07530)	pilB	767935..769329 (+)	1395	WP_011271972.1	GspE/PulE family protein	Machinery gene
K6J57_RS03940 (CHBNII7_07540)	pilC	769326..770543 (+)	1218	WP_014550481.1	type II secretion system F family protein	Machinery gene
K6J57_RS03945 (CHBNII7_07550)	pilD	770540..771232 (+)	693	WP_014550482.1	A24 family peptidase	Machinery gene
K6J57_RS03950 (CHBNII7_07560)	rho	771286..772548 (-)	1263	WP_005648966.1	transcription termination factor Rho	-
K6J57_RS03955 (CHBNII7_07570)	metJ	772796..773113 (+)	318	WP_005631186.1	met regulon transcriptional regulator MetJ	-
K6J57_RS03960 (CHBNII7_07580)	cueR	773127..773513 (-)	387	WP_005648963.1	Cu(I)-responsive transcriptional regulator	-
K6J57_RS03965 (CHBNII7_07590)	-	773590..773796 (+)	207	WP_005666692.1	heavy-metal-associated domain-containing protein	-
K6J57_RS03970 (CHBNII7_07600)	-	773882..774088 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
K6J57_RS03975 (CHBNII7_07610)	-	774174..774380 (+)	207	WP_005666693.1	heavy-metal-associated domain-containing protein	-
K6J57_RS03980 (CHBNII7_07620)	-	774454..774660 (+)	207	WP_005631184.1	heavy-metal-associated domain-containing protein	-
K6J57_RS03985 (CHBNII7_07630)	-	774746..774952 (+)	207	WP_005666693.1	heavy-metal-associated domain-containing protein	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 26683.67 Da
• Isoelectric Point: 8.5626

>NTDB_id=70938 K6J57_RS03945 WP_014550482.1 770540..771232(+) (pilD) [Haemophilus influenzae strain CHBN-II-7 isolate 13H35]
MIYFTMFLLGGILGIALWFYLSGFITRLQQEIYATYIELFPQNFLSFQPSVSSIQQKKCGHILRYFLNVGVEFIFLQIAF
KDSTFAIWLGLTLLILWAISYLDWHYQLISTTLCLWLLTIGLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFLLLASVLGICFSLIHKKKKEFIPFAPFMNLSAVIIYFVKYYGY

Nucleotide

• Length: 693 bp

>NTDB_id=70938 K6J57_RS03945 WP_014550482.1 770540..771232(+) (pilD) [Haemophilus influenzae strain CHBN-II-7 isolate 13H35]
ATGATTTACTTCACAATGTTTTTATTAGGCGGTATCTTAGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACCCG
TTTACAGCAAGAGATTTATGCGACTTATATTGAATTATTTCCACAAAACTTTCTGTCATTTCAGCCTAGCGTTTCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTAAATGTTGGGGTAGAATTTATATTTTTACAAATTGCCTTC
AAGGACTCTACTTTCGCTATATGGCTAGGGCTCACACTTCTTATCCTTTGGGCAATCAGTTATCTTGATTGGCACTATCA
ACTTATTTCTACTACACTCTGTTTATGGCTACTTACAATCGGTTTATTTGGAGCAGACAATAATTTTTCATTGCTTACGT
TATCTGAAAGCATAAAAAGTGCGGCAAGTTTTTTTATTGTTTTCTACGCAATCTATTGGATTGCAAAATTCTATTACGGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACCTTACCGCACTT
TTTATTATTAGCCTCAGTTCTTGGAATATGTTTTTCGCTTATTCATAAAAAGAAAAAAGAATTTATACCTTTTGCCCCTT
TTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGATATTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (92-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Haemophilus influenzae 86-028NP	89.565	100	0.896
pilD	Haemophilus influenzae Rd KW20	89.13	100	0.891