Detailed information NTG0708964

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NL113_RS13090
• Genome accession: NZ_CP101130
• Coordinates: 2665207..2666364 (+)
• Length: 385 a.a.
• NCBI ID: WP_006639267.1
• Uniprot ID: M5P1Q6
• Organism: Bacillus sp. KRF7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2660207..2671364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NL113_RS13070	-	2660740..2661921 (+)	1182	WP_006639271.1	glycosyltransferase	-
NL113_RS13075	-	2662044..2663108 (+)	1065	WP_006639270.1	glycosyltransferase family 4 protein	-
NL113_RS13080	-	2663251..2664330 (-)	1080	WP_006639269.1	LCP family protein	-
NL113_RS13085	-	2664347..2664985 (-)	639	WP_006639268.1	YigZ family protein	-
NL113_RS13090	degS	2665207..2666364 (+)	1158	WP_006639267.1	histidine kinase	Regulator
NL113_RS13095	degU	2666446..2667135 (+)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
NL113_RS13100	-	2667255..2668097 (+)	843	WP_006639266.1	DegV family protein	-
NL113_RS13105	comFA	2668290..2669636 (+)	1347	WP_006639265.1	DEAD/DEAH box helicase	Machinery gene
NL113_RS13110	-	2669693..2669977 (+)	285	WP_006639264.1	late competence development ComFB family protein	-
NL113_RS13115	comFC	2669934..2670668 (+)	735	WP_006639263.1	ComF family protein	Machinery gene
NL113_RS13120	-	2670726..2671145 (+)	420	WP_006639262.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44603.33 Da
• Isoelectric Point: 7.0403

>NTDB_id=708964 NL113_RS13090 WP_006639267.1 2665207..2666364(+) (degS) [Bacillus sp. KRF7]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEAEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAKSKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=708964 NL113_RS13090 WP_006639267.1 2665207..2666364(+) (degS) [Bacillus sp. KRF7]
GTGAGTGTTTCCAAAATGGACTCCAAAGTCTTAGATTCAATTATTATGAAAATGTTAAAAACCGTGGACGGGAGCAAAGA
TGAAGTCTTTCAAATCGGCGAACAATCCCGCCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATAAAGCAGCAGG
TCAACGAAGTCATTGATCTCGGAGACAGATTAGAGGTACATGCCAGGCATGCGAGGAACCGTTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGCGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTAGAGCTGACGATGAT
TCAGCAGCGCGAAAAACAGCTTAGAGAGAAACGCGACGATCTGGAAAGGCGCCTCCTTGGCCTTCAGGAAATCATTGAAC
GTTCCGAAGGGCTTGTCAGTCAAATTACAGTTGTCTTAAACTATTTAAACCAAGACTTGCGCCAAGTTGGCGTTTTATTG
GAAGATGCACAGGCAAAACAGGATTTCGGTCTTCGAATTATCGAAGCGCAGGAAGAAGAAAGAAAAAGAGTGTCGCGTGA
GATTCACGACGGCCCAGCGCAAATGCTGGCAAATGTGATGATGAGATCGGAATTGATAGAACGGATATTCAGGGACAAGG
GAACGGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGAAATGCCCTTTATGAAGTCAGACGGATCATA
TATGATTTAAGGCCGATGGCTTTAGATGACCTGGGGCTAATTCCGACGCTCAGAAAGTATTTGAACACAATCGAAGATTA
TCATGGGAAAGCGAAAATTCATTTCCATTGTATCGGGGAATCTGAAGAAAGACGAATTGCACCGCGCTTTGAGGTGGCGC
TTTTCAGGCTTGCTCAAGAAGCGGTCACAAATGCCCTGAAACATTCCGAATCGACCGAAATTCATGTTAAAGTAGAAGTA
ACGAAAGATTTTGTTACTCTGATTATAAAGGATAACGGAAACGGCTTTGATTTAAAAGAAGCGAAAAGCAAGAAAAACAA
ATCTTTCGGTCTGCTCGGGATGAAGGAAAGAGTCGATTTGCTTGAAGGGACAATGACGATTGATTCAAAAATAGGTCTCG
GGACATTTATTTTGATTAAAGTTCCGCTTTCATTGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: M5P1Q6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894