Detailed information NTG0708895

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NK667_RS03460
• Genome accession: NZ_CP101125
• Coordinates: 750441..752675 (+)
• Length: 744 a.a.
• NCBI ID: WP_054613851.1
• Uniprot ID: -
• Organism: Pseudomonas nunensis strain In5
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 745441..757675

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NK667_RS03435 (NK667_03435)	-	746464..747123 (+)	660	WP_054613848.1	transglutaminase-like domain-containing protein	-
NK667_RS03440 (NK667_03440)	-	747167..747790 (+)	624	WP_054613849.1	glutathione S-transferase family protein	-
NK667_RS03445 (NK667_03445)	-	747923..748855 (+)	933	WP_054051734.1	ABC transporter ATP-binding protein	-
NK667_RS03450 (NK667_03450)	-	748852..749631 (+)	780	WP_054051736.1	ABC transporter permease	-
NK667_RS03455 (NK667_03455)	-	749789..750304 (-)	516	WP_054613850.1	DUF2062 domain-containing protein	-
NK667_RS03460 (NK667_03460)	comA	750441..752675 (+)	2235	WP_054613851.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NK667_RS03465 (NK667_03465)	exbB	752762..753400 (+)	639	WP_054051742.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
NK667_RS03470 (NK667_03470)	-	753397..753825 (+)	429	WP_054051743.1	ExbD/TolR family protein	-
NK667_RS03475 (NK667_03475)	lpxK	753825..754835 (+)	1011	WP_054613852.1	tetraacyldisaccharide 4'-kinase	-
NK667_RS03480 (NK667_03480)	-	754861..755046 (+)	186	WP_007945752.1	Trm112 family protein	-
NK667_RS03485 (NK667_03485)	kdsB	755043..755807 (+)	765	WP_054051747.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NK667_RS03490 (NK667_03490)	-	755807..756271 (+)	465	WP_054613853.1	low molecular weight protein-tyrosine-phosphatase	-
NK667_RS03495 (NK667_03495)	murB	756268..757287 (+)	1020	WP_054613854.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81486.74 Da
• Isoelectric Point: 10.0949

>NTDB_id=708895 NK667_RS03460 WP_054613851.1 750441..752675(+) (comA) [Pseudomonas nunensis strain In5]
MRTGMVALALGLLALRFLPVLPPVWLWLLLPVVGLMLLPFPTYPLAFFLFGFSWACGQAQSALDDRLPANLDGETRWVEG
RVVGLPQSSEKVLRFELADARSRHGSVPPLMRLAWYGGPPVNSGERWRMAVKLKRPTGLLNPHAFDYDAWLLAQGIGATG
TVKDGQRLSSARWAWRDGIRQRLLSVDAQGRAGALAALVLGDGTGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
IAGLARYGLWPVRWPWLPWACGLAFAAALGYGLLAGFEVPVRRACVMIGLVLLWRLRFRHLGAWWPLLLALDGVLLLDPL
ASLQPGFWLSFAAVAVLIFTFGGRLGPWRWWQTWTRAQWLIAIGLCPLLLMLGLPISVSGPLVNLLAVPWISLVVLPPAL
LGTLLLPVPYVGEGLLWLAGGLIDLLFKGLALMANQLPAWVPVAVPPWIGAIGALGAFLLLMPRGVPLRPLGWPMLLLLA
FPPREEVPEGWAEIWQLDVGQGLAILVRTRQHTLLYDAGPRFGDFDLGERVVLPALRKLGVNGVDLMLLSHADADHAGGA
RAVSQGLKVARVISGDPLALPTELQAEGCESGQQWTWDGVTFRLWQWSAASESNQKSCVLQIEANGERLLLTGDIDTHAE
RALLDSPLAVPTDWLAAPHHGSRSSSSMALLTTLQPKAVLISRGHGNSFGHPHPTVMARYRKRGLHIYDSAEHGAVRLQL
GSFKPPRTMRQQRRFWRDVPALNK

Nucleotide

• Length: 2235 bp

>NTDB_id=708895 NK667_RS03460 WP_054613851.1 750441..752675(+) (comA) [Pseudomonas nunensis strain In5]
ATGCGCACAGGGATGGTGGCGCTGGCGCTCGGGTTATTGGCGTTGCGTTTTTTACCGGTGTTACCGCCGGTCTGGTTATG
GTTGTTGCTGCCGGTGGTGGGTTTGATGTTGCTGCCCTTTCCCACGTATCCGTTGGCATTTTTTCTGTTTGGCTTCAGTT
GGGCCTGTGGACAGGCGCAATCGGCGCTGGACGATCGACTGCCAGCGAATCTGGACGGTGAAACCCGCTGGGTCGAAGGT
CGAGTGGTGGGTTTGCCGCAGAGCAGCGAGAAAGTGCTGCGTTTCGAATTGGCAGACGCGCGTTCGCGACACGGATCTGT
GCCGCCGCTGATGCGCCTGGCCTGGTACGGAGGGCCGCCGGTCAATAGCGGCGAACGCTGGCGGATGGCGGTGAAGTTGA
AGCGCCCGACCGGCCTGCTCAATCCCCACGCTTTCGATTACGACGCCTGGCTGCTGGCACAAGGCATCGGCGCGACCGGC
ACGGTCAAGGATGGCCAGCGCCTGTCATCCGCCCGCTGGGCCTGGCGCGACGGTATTCGCCAGCGTTTGCTAAGTGTCGA
TGCCCAAGGGCGAGCCGGAGCGCTGGCGGCGTTGGTGCTGGGCGATGGCACCGGGTTGAGCCGCGAGGACTGGCAGGTGC
TGCAAGACACCGGCACCGTGCACCTGCTGGTGATTTCCGGGCAGCACATCGGTTTGCTCGCGGGTTTGGTGTATTTGCTG
ATCGCCGGGCTCGCCCGATATGGCCTGTGGCCGGTGCGTTGGCCCTGGTTGCCGTGGGCGTGTGGGCTGGCATTCGCTGC
GGCGCTCGGTTATGGGCTGCTGGCCGGTTTCGAAGTACCGGTGCGCCGGGCCTGCGTGATGATTGGCCTGGTGCTGTTGT
GGCGGCTGCGCTTTCGTCATCTCGGCGCTTGGTGGCCGTTGTTGCTGGCGCTGGATGGCGTCTTGTTGCTGGACCCGCTC
GCGAGTCTGCAGCCCGGATTCTGGCTGTCCTTTGCGGCGGTGGCGGTGTTGATTTTCACTTTCGGCGGTCGGTTGGGCCC
TTGGCGCTGGTGGCAAACCTGGACCCGCGCCCAATGGCTGATTGCAATCGGCCTGTGCCCGCTGCTGCTGATGTTGGGGT
TGCCCATCAGCGTGAGTGGACCGCTGGTTAATCTGCTCGCGGTGCCGTGGATCAGTCTGGTGGTCTTGCCGCCAGCCTTG
CTCGGGACATTGCTGTTGCCGGTGCCTTACGTGGGGGAAGGGTTGCTGTGGTTGGCCGGCGGGCTGATCGATTTGCTGTT
CAAGGGCCTGGCACTCATGGCGAATCAGTTGCCCGCGTGGGTGCCGGTGGCAGTGCCGCCATGGATCGGGGCTATCGGCG
CATTGGGCGCCTTTCTTCTATTAATGCCACGCGGCGTTCCGTTGCGCCCATTGGGCTGGCCGATGCTATTGCTGCTGGCA
TTTCCACCGCGCGAAGAGGTGCCCGAAGGCTGGGCCGAGATCTGGCAACTGGATGTCGGCCAGGGTTTGGCAATCCTGGT
GCGCACTCGCCAGCACACGCTGCTGTACGACGCCGGCCCGCGTTTCGGTGATTTCGACCTCGGTGAACGGGTGGTTCTGC
CGGCATTGCGCAAACTCGGGGTGAACGGAGTCGATCTGATGCTGCTCAGTCACGCCGACGCCGACCACGCTGGTGGTGCG
CGAGCCGTCTCACAGGGACTGAAAGTAGCGCGGGTGATCAGTGGCGATCCGCTGGCGCTGCCAACAGAGTTACAGGCCGA
GGGCTGCGAAAGTGGCCAGCAATGGACCTGGGATGGCGTGACCTTCCGGCTCTGGCAATGGTCGGCGGCCAGCGAAAGCA
ATCAGAAATCCTGCGTCTTGCAAATCGAAGCCAATGGTGAACGCCTGCTGCTGACCGGCGACATCGATACCCACGCCGAA
CGCGCGCTCCTGGACAGCCCATTGGCGGTGCCCACCGATTGGCTGGCGGCGCCACACCACGGCAGTCGCAGTTCGTCATC
CATGGCACTGCTCACCACGCTGCAACCCAAAGCGGTGCTGATCTCGCGCGGTCACGGCAACTCTTTCGGGCATCCCCATC
CGACGGTCATGGCGCGGTATCGCAAACGGGGCTTGCACATCTATGACAGCGCCGAGCACGGCGCCGTCCGTCTGCAACTG
GGCAGCTTCAAACCACCGCGAACGATGCGTCAACAACGGCGCTTCTGGCGCGATGTGCCTGCGCTGAATAAATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-463)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.17	96.64	0.601
comA	Ralstonia pseudosolanacearum GMI1000	33.491	100	0.38