Detailed information NTG0708736

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: NGC85_RS05315
• Genome accession: NZ_CP101115
• Coordinates: 1157515..1159941 (+)
• Length: 808 a.a.
• NCBI ID: WP_254805089.1
• Uniprot ID: -
• Organism: Acinetobacter sp. Z1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1152187..1164757	1157515..1159941	within	0

Gene organization within MGE regions

Location: 1152187..1164757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NGC85_RS05285 (NGC85_05285)	-	1152367..1153305 (-)	939	WP_254805085.1	hypothetical protein	-
NGC85_RS05290 (NGC85_05290)	-	1153520..1153990 (+)	471	WP_005055028.1	YaiI/YqxD family protein	-
NGC85_RS05295 (NGC85_05295)	-	1153998..1154891 (+)	894	WP_254805086.1	DMT family transporter	-
NGC85_RS05300 (NGC85_05300)	-	1154904..1155491 (-)	588	WP_254805087.1	PilZ domain-containing protein	-
NGC85_RS05305 (NGC85_05305)	-	1155517..1156752 (+)	1236	WP_005062758.1	lipoprotein-releasing ABC transporter permease subunit	-
NGC85_RS05310 (NGC85_05310)	lolD	1156745..1157431 (+)	687	WP_254805088.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
NGC85_RS05315 (NGC85_05315)	comA/comEC	1157515..1159941 (+)	2427	WP_254805089.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NGC85_RS05320 (NGC85_05320)	-	1159962..1160894 (-)	933	WP_254805090.1	lysophospholipid acyltransferase family protein	-
NGC85_RS05325 (NGC85_05325)	sppA	1161030..1162052 (+)	1023	WP_169109587.1	signal peptide peptidase SppA	-
NGC85_RS05330 (NGC85_05330)	-	1162220..1163011 (+)	792	WP_254805091.1	alpha/beta fold hydrolase	-
NGC85_RS05335 (NGC85_05335)	purN	1163049..1163690 (-)	642	WP_254805553.1	phosphoribosylglycinamide formyltransferase	-
NGC85_RS05340 (NGC85_05340)	purM	1163687..1164757 (-)	1071	WP_254805092.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 808 a.a.
• Molecular weight: 92498.78 Da
• Isoelectric Point: 8.9654

>NTDB_id=708736 NGC85_RS05315 WP_254805089.1 1157515..1159941(+) (comA/comEC) [Acinetobacter sp. Z1]
MLKIILLGWIAGIAMIGHHLSFISTSWWIWLSIAMIIFGMGCIKRNLYFDHPLYKCLILISASWALFCTGYHFADSRLEQ
RLELRELETQPFEAIVYIKKIDEPTLEGHKQIAEILNRHAQPVNWMLYLKNNRHVSINTQTLQLGHYYRIYGKIKPAHSY
AIAGAFDQEKWFLQQNIMSAFSVQNIQALTLDEIYGLGYQPHLKQQQAIPAKFLLKIEKIRLTFRQMLERSSLNNKGLLL
ALLTGDESLLSSTQKDQFQQLGISHLLAISGPHVLIFAFMFTWLLKITVQRFYPKLYLWKPKQILLLLPFVFSVLLYVAF
VGFEIPAIRTLLTVIIASLFLIFRQSLQPFALLVYSASLLLIYDPFSILSAAFWLSYGACFILLRIYQTIEQLPNDQIST
VSQRFFFAIKILVESQWKIFVALMPLVLIFFQQISWVAPLSNLISIPLLSGLVVPVNIFAACVWLISAPLGQFFFQISDS
LLSLLMVMLNVLQAISPDLYGVSCTPLMMLCLIIGILIIFMPRGTIPKAWAIICFLPILFGLKAQPTVLSILDVGQGQAV
LLQHPEQVWMIDTGGSYDESKFSLGERVVIPFLRQKGVRSLDHVILSHLDQDHSGAFNSIQNKFEISNVQSNERNDKIKV
KDKFSFCQQGQNWSYTNLKIEILFPHRQELVYAKDQQNEYSCVVYIQFLNAQPYQTFLIMGDAGWETEYKLLQQYPDLKV
DVLVLGHHGSKHSSAYDFLAVLKPKIAIASAGYNNRYGHPSEEVKNRLHALNIPLFNTVQTGTISFSFDNGKVEIQQQRH
ALKWLNKE

Nucleotide

• Length: 2427 bp

>NTDB_id=708736 NGC85_RS05315 WP_254805089.1 1157515..1159941(+) (comA/comEC) [Acinetobacter sp. Z1]
ATGTTAAAAATTATTTTGTTGGGCTGGATTGCAGGAATTGCAATGATTGGGCACCACCTCAGTTTTATATCTACATCATG
GTGGATATGGCTAAGTATCGCGATGATTATCTTTGGTATGGGTTGTATTAAACGCAATCTGTATTTTGATCACCCTCTTT
ATAAATGTCTAATTTTAATCAGTGCCAGTTGGGCGCTATTTTGTACTGGATATCATTTTGCTGATTCAAGATTAGAACAA
AGACTTGAACTGAGAGAGTTAGAAACACAGCCATTTGAAGCAATTGTTTATATAAAGAAGATAGATGAGCCAACCCTAGA
AGGGCATAAGCAAATTGCTGAAATACTCAATCGACATGCTCAACCTGTTAATTGGATGCTTTATTTAAAAAATAATCGTC
ATGTATCGATTAACACGCAAACTTTGCAACTTGGACATTATTATCGAATTTATGGCAAGATCAAACCAGCGCATAGCTAT
GCTATTGCTGGAGCATTTGATCAGGAAAAATGGTTTTTACAGCAAAATATAATGTCTGCATTCTCTGTACAAAATATCCA
AGCTCTAACATTAGATGAGATATATGGCTTAGGTTATCAACCTCATTTAAAACAACAACAAGCCATTCCAGCGAAATTTT
TATTAAAGATTGAAAAAATCCGTTTAACATTTCGGCAAATGTTGGAACGATCTTCCTTGAATAATAAAGGTTTACTTTTG
GCCTTACTCACGGGGGATGAAAGTCTTTTATCGAGCACTCAGAAAGATCAGTTTCAACAGTTGGGTATTTCTCATTTGTT
GGCGATTTCAGGTCCACATGTTTTGATCTTTGCATTTATGTTTACTTGGTTGCTGAAAATAACGGTTCAACGTTTTTATC
CAAAGCTATATTTATGGAAACCTAAACAAATTTTATTGCTCTTACCATTTGTCTTTAGCGTTTTGCTATACGTTGCCTTT
GTCGGTTTTGAAATTCCTGCAATAAGGACTTTATTAACAGTTATCATCGCCAGTCTTTTTCTAATTTTTCGACAATCCCT
CCAACCATTTGCGCTACTTGTGTATAGCGCGAGTTTATTACTTATTTATGATCCGTTTAGTATTCTATCCGCTGCATTTT
GGTTGTCTTATGGCGCTTGTTTTATTTTATTGAGAATTTATCAGACCATAGAACAATTGCCTAATGATCAGATTTCAACT
GTCTCACAACGATTTTTTTTCGCAATTAAAATATTGGTCGAATCACAGTGGAAGATATTTGTTGCCTTGATGCCGTTGGT
CTTAATTTTTTTCCAACAAATTTCTTGGGTCGCGCCACTTAGTAATTTAATCTCTATTCCTTTACTAAGTGGTTTAGTTG
TTCCTGTGAACATTTTTGCAGCATGTGTATGGCTCATTAGTGCTCCATTAGGACAGTTTTTCTTTCAGATCAGTGATTCA
TTACTTTCTTTATTAATGGTCATGCTGAACGTTTTACAGGCCATTTCACCTGATTTGTATGGTGTAAGTTGTACACCGTT
AATGATGCTTTGTTTGATTATCGGCATATTGATTATTTTCATGCCAAGAGGAACCATTCCGAAAGCTTGGGCGATCATTT
GTTTTTTACCGATATTGTTTGGCTTAAAAGCTCAACCTACCGTTTTAAGTATTTTAGATGTAGGTCAAGGACAAGCGGTT
TTGTTACAACATCCTGAACAGGTATGGATGATTGATACAGGTGGTTCTTATGATGAGAGCAAATTTAGCTTAGGTGAGCG
AGTGGTGATCCCTTTTCTTAGGCAAAAAGGAGTTCGATCTTTAGATCATGTAATTTTATCTCATCTGGATCAAGATCATA
GTGGGGCTTTTAATTCGATACAAAATAAATTTGAAATTAGTAATGTACAGTCGAATGAACGAAATGACAAAATTAAGGTT
AAGGATAAATTTTCATTTTGCCAGCAAGGTCAAAACTGGTCATATACGAATCTAAAGATTGAAATATTATTTCCACATCG
ACAAGAACTGGTTTATGCGAAAGATCAGCAGAATGAATATTCATGTGTGGTTTACATCCAGTTTCTCAATGCACAGCCTT
ATCAAACTTTCCTCATTATGGGTGATGCTGGATGGGAAACTGAATATAAGTTATTGCAGCAATATCCTGACTTAAAGGTT
GATGTTTTAGTGCTTGGACATCATGGTAGTAAACACAGTTCTGCATATGATTTCTTAGCAGTATTAAAACCTAAAATAGC
AATTGCATCAGCAGGTTATAATAATCGCTATGGTCATCCAAGTGAGGAAGTAAAAAATCGATTGCATGCTTTAAATATTC
CGTTATTCAATACAGTACAAACAGGAACAATAAGTTTTAGCTTTGATAATGGAAAGGTAGAAATTCAACAACAGCGCCAT
GCACTCAAATGGCTAAATAAAGAATAG

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-187)

• Competence protein (Competence) (242-522)

• Metallo-beta-lactamase superfamily (Lactamase_B) (553-626)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	55.734	100	0.559
comA/comEC	Acinetobacter baumannii strain A118	55.24	100	0.554
comA/comEC	Acinetobacter baylyi ADP1	51.481	100	0.516