Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NGC85_RS03500 Genome accession   NZ_CP101115
Coordinates   731193..731576 (+) Length   127 a.a.
NCBI ID   WP_005055851.1    Uniprot ID   N9F5Z7
Organism   Acinetobacter sp. Z1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 726193..736576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NGC85_RS03475 (NGC85_03475) - 726556..727302 (+) 747 WP_254730381.1 IS5 family transposase -
  NGC85_RS03480 (NGC85_03480) - 727465..727809 (+) 345 WP_254804854.1 zinc ribbon domain-containing protein YjdM -
  NGC85_RS03485 (NGC85_03485) - 727954..728292 (+) 339 WP_005061609.1 YegP family protein -
  NGC85_RS03490 (NGC85_03490) - 728351..730066 (-) 1716 WP_254804855.1 proline--tRNA ligase -
  NGC85_RS03495 (NGC85_03495) - 730271..730915 (-) 645 WP_005061615.1 hypothetical protein -
  NGC85_RS03500 (NGC85_03500) pilG 731193..731576 (+) 384 WP_005055851.1 twitching motility response regulator PilG Regulator
  NGC85_RS03505 (NGC85_03505) - 731597..731959 (+) 363 WP_005061617.1 PleD family two-component system response regulator -
  NGC85_RS03510 (NGC85_03510) - 731999..732535 (+) 537 WP_005061620.1 chemotaxis protein CheW -
  NGC85_RS03515 (NGC85_03515) - 732582..734669 (+) 2088 WP_254804856.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14196.33 Da        Isoelectric Point: 4.7278

>NTDB_id=708735 NGC85_RS03500 WP_005055851.1 731193..731576(+) (pilG) [Acinetobacter sp. Z1]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVGA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=708735 NGC85_RS03500 WP_005055851.1 731193..731576(+) (pilG) [Acinetobacter sp. Z1]
ATGGAAGATAAATTTCAAAATTTAAAGGTAATGGTAATTGACGATTCAAAAACAATTCGTCGTACAGCAGAAACATTATT
GCAGCGTGAAGGTTGTGAAGTAATCACAGCCGTTGATGGTTTTGAAGCACTATCAAAAATTGCTGAAGCTAATCCTGATA
TCGTTTTTGTTGACATTATGATGCCTCGTTTAGACGGTTATCAAACCTGCGCATTAATTAAAAACTCTCTAAATTATCAA
AATATTCCTGTGATCATGTTATCAAGCAAAGACGGTTTGTTTGATCAGGCGAAAGGTCGTGTTGTGGGCTCAGATGAGTA
TTTAACTAAGCCATTTAGTAAAGATGAGCTTTTAAATGCGATTCGTAACCACGTTGGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9F5Z7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37