Detailed information NTG0706871

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: PF977_RS07005
• Genome accession: NZ_CP116012
• Coordinates: 1373141..1373746 (+)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain SRCM124333
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1368141..1378746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PF977_RS06965 (PF977_06965)	-	1368308..1368448 (-)	141	WP_004398683.1	hypothetical protein	-
PF977_RS06970 (PF977_06970)	-	1368455..1369006 (-)	552	WP_373431096.1	DUF5412 family protein	-
PF977_RS06980 (PF977_06980)	-	1368986..1369108 (+)	123	WP_003229707.1	hypothetical protein	-
PF977_RS06985 (PF977_06985)	yrzF	1369154..1369801 (-)	648	WP_003246159.1	phosphotransferase	-
PF977_RS06990 (PF977_06990)	iolG	1370039..1371064 (+)	1026	WP_015714446.1	inositol 2-dehydrogenase	-
PF977_RS06995 (PF977_06995)	csbX	1371135..1372442 (+)	1308	WP_015714445.1	MFS transporter	-
PF977_RS07000 (PF977_07000)	bofC	1372490..1373002 (+)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
PF977_RS07005 (PF977_07005)	ruvA	1373141..1373746 (+)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
PF977_RS07010 (PF977_07010)	ruvB	1373757..1374761 (+)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
PF977_RS07015 (PF977_07015)	yrzS	1374754..1374954 (+)	201	WP_015714444.1	DUF2905 domain-containing protein	-
PF977_RS07020 (PF977_07020)	queA	1374984..1376012 (+)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
PF977_RS07025 (PF977_07025)	tgt	1376039..1377184 (+)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
PF977_RS07030 (PF977_07030)	yajC	1377221..1377487 (+)	267	WP_004398708.1	preprotein translocase subunit YajC	-
PF977_RS07035 (PF977_07035)	-	1377544..1377933 (-)	390	WP_031315243.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=706871 PF977_RS07005 WP_003229717.1 1373141..1373746(+) (ruvA) [Bacillus subtilis strain SRCM124333]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=706871 PF977_RS07005 WP_003229717.1 1373141..1373746(+) (ruvA) [Bacillus subtilis strain SRCM124333]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408