Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NLV76_RS16105 Genome accession   NZ_CP100752
Coordinates   3122166..3124472 (-) Length   768 a.a.
NCBI ID   WP_254501361.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B301     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3117166..3129472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS16065 (NLV76_16065) - 3117634..3118065 (+) 432 WP_254501357.1 Na(+)/H(+) antiporter subunit B -
  NLV76_RS16070 (NLV76_16070) - 3118065..3118406 (+) 342 WP_044158938.1 Na(+)/H(+) antiporter subunit C -
  NLV76_RS16075 (NLV76_16075) - 3118399..3119880 (+) 1482 WP_059292645.1 Na+/H+ antiporter subunit D -
  NLV76_RS16080 (NLV76_16080) - 3119886..3120362 (+) 477 WP_254501358.1 Na+/H+ antiporter subunit E -
  NLV76_RS16085 (NLV76_16085) - 3120362..3120646 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  NLV76_RS16090 (NLV76_16090) mnhG 3120630..3121004 (+) 375 WP_254501359.1 monovalent cation/H(+) antiporter subunit G -
  NLV76_RS16095 (NLV76_16095) - 3121043..3121423 (-) 381 WP_044158943.1 hotdog fold thioesterase -
  NLV76_RS16100 (NLV76_16100) comA 3121441..3122085 (-) 645 WP_254501360.1 two-component system response regulator ComA Regulator
  NLV76_RS16105 (NLV76_16105) comP 3122166..3124472 (-) 2307 WP_254501361.1 histidine kinase Regulator
  NLV76_RS16110 (NLV76_16110) comX 3124488..3124709 (-) 222 WP_059292642.1 competence pheromone ComX -
  NLV76_RS16115 (NLV76_16115) - 3124706..3125575 (-) 870 WP_254501363.1 polyprenyl synthetase family protein -
  NLV76_RS16120 (NLV76_16120) degQ 3125760..3125900 (-) 141 WP_254501364.1 degradation enzyme regulation protein DegQ Regulator
  NLV76_RS16125 (NLV76_16125) - 3126361..3126729 (+) 369 WP_254501365.1 hypothetical protein -
  NLV76_RS16130 (NLV76_16130) - 3126705..3127934 (-) 1230 WP_254501366.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89422.51 Da        Isoelectric Point: 8.0517

>NTDB_id=706707 NLV76_RS16105 WP_254501361.1 3122166..3124472(-) (comP) [Bacillus halotolerans strain MEC_B301]
MHINNNVYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYEYYSGVKKGDIILEVNGQRGSEIQ
LESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKIRKSSSAFVLILFLLFVSVAY
VSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTRLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSNLN
LISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVYQF
MTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYYVKLTFVIYLLMFAVFYFKEIIDFRFKLKRFTEKFN
YQDGIFKFTQLIKQASSVDQVLNYFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKIKE
FKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKLMY
TIEEKQRSDLARDLHDSVLQDLISLKRQWELFLAEFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDL
GLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGV
GFDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=706707 NLV76_RS16105 WP_254501361.1 3122166..3124472(-) (comP) [Bacillus halotolerans strain MEC_B301]
ATGCACATAAATAATAACGTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCAGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATGAATATTATTCAGGTGTAAAAAAAGGTGACATCATTCTTGAAGTGAATGGGCAAAGAGGAAGCGAAATCCAG
TTAGAGAGCGGAAGATTGGTCAATGTAGAAAGCTTAACTGTTGAGAGAGATAATAAATCATTTCATTTACAAAATGTAAG
CCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCACTCATATCTTATTCAATCTGTTTATTTTGTATATTTTTTG
TTTACAGAATAAATAAAATAAGAAAATCATCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTAGCATAT
GTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTACCTGCTTGTCCTTACTTTAGTAAGTTGTCCAATTTT
ATATATACATTTCATATATAAATACTTTGCGGAATTGGGCACTAGGTTATTCAAAAAGAAGATTTTAATCATAATGTATA
TACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCTAACTTGAAC
TTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATCCTTATCCATCAAGGGATTAGAAAAATCAAACAAAATGAGCA
AAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCCTTTATTATCTTTTTTGTTATTCCCTATG
TGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTGTATCAATTT
ATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACCTACTGT
TATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTACGTTAAACTAACATTTGTAATATATT
TGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAATTTAAT
TATCAAGATGGAATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATTACTTTAAAAA
TACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTAGTAAGA
ACAACTTTAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATTAAAGAG
TTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTATAATAC
TTTTAAATTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACGTTATGA
AAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCGGTATGGCTCAAAAAACTCATGTAC
ACCATTGAAGAAAAACAACGTTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCATTAAAACG
GCAGTGGGAGCTGTTTTTGGCTGAGTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTACAGA
TGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTG
GGACTGGTGAAGGCGCTGTCCAAGCTGGTAGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAG
ATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAATGCAGTGAAAC
ATTCTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGATGATGGTGTC
GGATTTGATCTGGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGA
TGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.007

100

0.551