Detailed information NTG0706039

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NLW79_RS18950
• Genome accession: NZ_CP100651
• Coordinates: 3662195..3663352 (-)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus halotolerans strain MEC_B334
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3657195..3668352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLW79_RS18920 (NLW79_18920)	-	3657456..3657875 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
NLW79_RS18925 (NLW79_18925)	comFC	3657949..3658671 (-)	723	WP_142396176.1	double zinc ribbon domain-containing protein	Machinery gene
NLW79_RS18930 (NLW79_18930)	-	3658635..3658931 (-)	297	WP_024123028.1	competence protein ComFB	-
NLW79_RS18935 (NLW79_18935)	comFA	3658977..3660374 (-)	1398	WP_106021953.1	ATP-dependent helicase ComFA	Machinery gene
NLW79_RS18940 (NLW79_18940)	-	3660481..3661326 (-)	846	WP_106019639.1	DegV family protein	-
NLW79_RS18945 (NLW79_18945)	degU	3661423..3662112 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NLW79_RS18950 (NLW79_18950)	degS	3662195..3663352 (-)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
NLW79_RS18955 (NLW79_18955)	-	3663569..3664222 (+)	654	WP_044159478.1	YigZ family protein	-
NLW79_RS18960 (NLW79_18960)	-	3664222..3665400 (+)	1179	WP_024123032.1	LCP family protein	-
NLW79_RS18965 (NLW79_18965)	-	3665472..3666548 (-)	1077	WP_151174552.1	glycosyltransferase family 4 protein	-
NLW79_RS18970 (NLW79_18970)	-	3666692..3667882 (-)	1191	WP_106019940.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=706039 NLW79_RS18950 WP_024123030.1 3662195..3663352(-) (degS) [Bacillus halotolerans strain MEC_B334]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=706039 NLW79_RS18950 WP_024123030.1 3662195..3663352(-) (degS) [Bacillus halotolerans strain MEC_B334]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGTCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTAGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGCTAGGACTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGACGGTCCTGCACAAATGCTGGCAAATGTTATGATGAGATCAGAATTAATTGAACGGATTTTCCGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGACAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACAATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992