Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NLW79_RS16965 Genome accession   NZ_CP100651
Coordinates   3267622..3269928 (-) Length   768 a.a.
NCBI ID   WP_254517859.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B334     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3262622..3274928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLW79_RS16925 (NLW79_16925) - 3263090..3263521 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  NLW79_RS16930 (NLW79_16930) - 3263521..3263862 (+) 342 WP_044158938.1 Na(+)/H(+) antiporter subunit C -
  NLW79_RS16935 (NLW79_16935) - 3263855..3265336 (+) 1482 WP_254517858.1 Na+/H+ antiporter subunit D -
  NLW79_RS16940 (NLW79_16940) - 3265342..3265818 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  NLW79_RS16945 (NLW79_16945) - 3265818..3266102 (+) 285 WP_106019477.1 Na(+)/H(+) antiporter subunit F1 -
  NLW79_RS16950 (NLW79_16950) mnhG 3266086..3266460 (+) 375 WP_024122678.1 monovalent cation/H(+) antiporter subunit G -
  NLW79_RS16955 (NLW79_16955) - 3266499..3266879 (-) 381 WP_044158943.1 hotdog fold thioesterase -
  NLW79_RS16960 (NLW79_16960) comA 3266897..3267541 (-) 645 WP_024122680.1 two-component system response regulator ComA Regulator
  NLW79_RS16965 (NLW79_16965) comP 3267622..3269928 (-) 2307 WP_254517859.1 histidine kinase Regulator
  NLW79_RS16970 (NLW79_16970) comX 3269944..3270165 (-) 222 WP_059292642.1 competence pheromone ComX -
  NLW79_RS16975 (NLW79_16975) - 3270162..3271031 (-) 870 WP_101864136.1 polyprenyl synthetase family protein -
  NLW79_RS16980 (NLW79_16980) degQ 3271216..3271356 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  NLW79_RS16985 (NLW79_16985) - 3271817..3272185 (+) 369 WP_106019478.1 hypothetical protein -
  NLW79_RS16990 (NLW79_16990) - 3272161..3273390 (-) 1230 WP_127696527.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89241.37 Da        Isoelectric Point: 8.3092

>NTDB_id=706032 NLW79_RS16965 WP_254517859.1 3267622..3269928(-) (comP) [Bacillus halotolerans strain MEC_B334]
MHINNNVYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYEYYSGVKKGDIILEVNGQKGSEIQ
LESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSSSAFVLILFLLFVSVAY
VSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSNLN
LISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVYQF
MTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYYVKLTFVIYLLMFAVFYFKEIIDFRFKLKRFTEKFN
YQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEINLLSKNNFKDLTYKNHEQYVKNFSGDIGKIKE
FKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLKDLKQQESNPVWLKKLMY
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDL
GLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGV
GFDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=706032 NLW79_RS16965 WP_254517859.1 3267622..3269928(-) (comP) [Bacillus halotolerans strain MEC_B334]
ATGCACATAAATAATAACGTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCAGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATGAATATTATTCAGGTGTAAAAAAAGGTGACATCATTCTTGAAGTGAATGGGCAAAAAGGAAGCGAAATCCAG
TTAGAGAGCGGAAGATTGGTCAACGTAGAAAGCTTAACTGTTGAGAGAGATAATAAATCATTTCATTTACAAAATGTAAG
CCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCACTCATATCTTATTCAATCTGTTTATTTTGTATATTTTTTG
TTTACAGAATAAATAAAGTAAGAAAATCATCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTAGCATAT
GTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTACCTGCTTGTCCTTACTTTAGTAAGTTGTCCAATTTT
ATATATACATTTCATATATAAATACTTTGCGGAATTGGGCACTAAGTTATTCAAAAAGAAGATTTTAATCATAATGTATA
TACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCTAACTTGAAC
TTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATCCTTATCCATCAAGGGATTAGAAAAATCAAACAAAATGAGCA
AAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCCTTTATTATCTTTTTTGTTATTCCCTATG
TGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTGTATCAATTT
ATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACCTACTGT
TATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTACGTTAAACTAACATTTGTAATATATT
TGCTTATGTTTGCTGTCTTTTACTTTAAAGAGATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAATTTAAT
TATCAAGATGGAATTTTTAAATTTACTCAGTTAATTAAGCAAGCATCATCGGTAGATCAAGTACTTAATCACTTTAAAAA
TACAATCCTAGAAGTATTAAACATAGATAATGCTTGTGTGTATGATAATTCTAAAGGGGAAATTAACCTCCTTAGTAAGA
ATAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAACTTTTCTGGTGATATCGGTAAAATTAAAGAG
TTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTATAATAC
TTTTAAATTAACAAGAGATGAAATTGCATGGCTTCAAACATTAGCGTTCTATACAAATGTCTCATTGGAAAACGTTATGA
AAATTGAAGAATTGATGGTGCATCTTAAGGATTTAAAACAACAGGAATCCAACCCGGTATGGCTCAAAAAACTCATGTAC
ACGATCGAAGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCAGTTCTTCAGGATTTGATTTCATTAAAACG
GCAGTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTGCAGA
TGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGAGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTG
GGACTGGTGAAGGCGTTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAG
ATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAACGCAGTGAAAC
ACTCTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGATGATGGTGTC
GGATTTGATCTAGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGA
TGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.527

100

0.556