Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   FGCSD_RS07970 Genome accession   NZ_AP018726
Coordinates   1597975..1598976 (-) Length   333 a.a.
NCBI ID   WP_003049927.1    Uniprot ID   A0A9X5LWR8
Organism   Streptococcus dysgalactiae strain Kdys0611     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1592975..1603976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGCSD_RS07955 (FGCSD_1547) - 1593947..1595281 (-) 1335 WP_129556042.1 glycosyltransferase family 4 protein -
  FGCSD_RS07960 (FGCSD_1548) - 1595283..1596281 (-) 999 WP_129556043.1 glycosyltransferase -
  FGCSD_RS07965 (FGCSD_1549) - 1596358..1597821 (-) 1464 WP_129556044.1 alpha-amylase -
  FGCSD_RS07970 (FGCSD_1550) ccpA 1597975..1598976 (-) 1002 WP_003049927.1 catabolite control protein A Regulator
  FGCSD_RS07975 (FGCSD_1551) - 1599150..1600235 (+) 1086 WP_129556045.1 Xaa-Pro peptidase family protein -
  FGCSD_RS07980 (FGCSD_1552) - 1600280..1600945 (+) 666 WP_129556046.1 NAD(P)H-dependent oxidoreductase -
  FGCSD_RS07985 (FGCSD_1553) - 1600955..1601332 (+) 378 WP_003049924.1 VOC family protein -
  FGCSD_RS07990 (FGCSD_1554) - 1601679..1602863 (+) 1185 WP_012766664.1 DNA/RNA non-specific endonuclease -
  FGCSD_RS07995 (FGCSD_1555) - 1603000..1603926 (+) 927 WP_129556047.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36683.74 Da        Isoelectric Point: 5.7248

>NTDB_id=70594 FGCSD_RS07970 WP_003049927.1 1597975..1598976(-) (ccpA) [Streptococcus dysgalactiae strain Kdys0611]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVSNVVDILAENHQSIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=70594 FGCSD_RS07970 WP_003049927.1 1597975..1598976(-) (ccpA) [Streptococcus dysgalactiae strain Kdys0611]
ATGAATACAGATGATACCATCACGATTTATGACGTTGCCCGTGAAGCTGGTGTTTCTATGGCAACTGTTAGTCGTGTTGT
TAATGGCAACAAAAACGTTAAGGAAAACACGCGTAAGAAAGTTTTAGAAGTCATTGACCGCCTAGATTATCGTCCAAATG
CTGTCGCACGTGGTCTCGCCAGCAAAAAAACAACAACCGTCGGGGTTGTGATTCCGAATATTGCAAACAGTTATTTTTCT
ATTTTAGCCAAAGGTATTGATGATATCGCCGCTATGTATAAATATAATATTGTACTTGCCTCTAGTGATGAGGATGATGA
CAAGGAGGTTAACGTTGTCAATACCCTCTTTGCTAAGCAAGTTGACGGTATTATCTTTATGGGGCACCATTTGACTGAAA
AAATCCGTGCGGAATTTTCACGCTCACGCACCCCGATTGTTTTAGCAGGGACAGTTGACCTTGATCATCAATTACCAAGT
GTTAATATTGACTATAAGGCAGCTGTGTCTAATGTGGTTGATATTTTGGCAGAAAACCATCAGAGCATTGCCTTTGTGTC
AGGACCACTTATTGATGACATCAATGGTAAAGTACGTTTGGCGGGGTACAAAGAAGGCTTGAAGCACAACAAACTTGACT
TCAAAGAAGGACTTGTTTTTGAAGCTAACTATTCTTATAAAGAAGGCTTTGAATTGGCACAACGTGTGATTAACTCAGGA
GCAACAGCAGCTTATGTGGCTGAAGATGAGTTAGCAGCGGGTCTTTTAAATGGTTTGTTTGAAGCAGGCAAACGCGTTCC
AGAAGATTTTGAAATCATCACAAGCAATGATTCACCAGTTGTTCAATATACCCGTCCAAACTTGAGTTCTATCAGCCAAC
CCGTTTACGACTTGGGAGCTGTCAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGCGGAACCACTAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553

Multiple sequence alignment