Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGCSD_RS07845 Genome accession   NZ_AP018726
Coordinates   1574016..1574825 (-) Length   269 a.a.
NCBI ID   WP_129556027.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain Kdys0611     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1569016..1579825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGCSD_RS07820 - 1569700..1569840 (+) 141 Protein_1485 IS3 family transposase -
  FGCSD_RS11100 (FGCSD_1520) - 1569851..1570162 (-) 312 Protein_1486 hypothetical protein -
  FGCSD_RS07835 (FGCSD_1523) - 1571825..1572847 (-) 1023 WP_129555386.1 IS30 family transposase -
  FGCSD_RS07840 (FGCSD_1524) - 1573059..1573934 (+) 876 WP_129556026.1 helix-turn-helix transcriptional regulator -
  FGCSD_RS07845 (FGCSD_1525) vicX 1574016..1574825 (-) 810 WP_129556027.1 MBL fold metallo-hydrolase Regulator
  FGCSD_RS07850 (FGCSD_1526) vicK 1574829..1576181 (-) 1353 WP_129556028.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGCSD_RS07855 (FGCSD_1527) vicR 1576174..1576884 (-) 711 WP_003049952.1 response regulator YycF Regulator
  FGCSD_RS07860 (FGCSD_1528) - 1577143..1577937 (+) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  FGCSD_RS07865 (FGCSD_1529) - 1577937..1578737 (+) 801 WP_129556029.1 transporter substrate-binding domain-containing protein -
  FGCSD_RS07870 (FGCSD_1530) - 1578751..1579452 (+) 702 WP_129556030.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30158.33 Da        Isoelectric Point: 6.0739

>NTDB_id=70591 FGCSD_RS07845 WP_129556027.1 1574016..1574825(-) (vicX) [Streptococcus dysgalactiae strain Kdys0611]
MSENGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=70591 FGCSD_RS07845 WP_129556027.1 1574016..1574825(-) (vicX) [Streptococcus dysgalactiae strain Kdys0611]
ATGAGTGAAAATGGTTTTAAATACAGTATTTTGGCATCCGGGTCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTTGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGTGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGTATCATGAAAGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGCGACCGAATGACAGGT
ATTATTGAAAACGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGTCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment