Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FGCSD_RS01175 | Genome accession | NZ_AP018726 |
| Coordinates | 207039..207992 (+) | Length | 317 a.a. |
| NCBI ID | WP_129555189.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae strain Kdys0611 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 202039..212992
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGCSD_RS01135 (FGCSD_0178) | - | 202865..203230 (+) | 366 | WP_129555183.1 | DUF1033 family protein | - |
| FGCSD_RS01140 (FGCSD_0179) | comYA | 203311..204252 (+) | 942 | WP_129555184.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGCSD_RS01145 (FGCSD_0180) | comYB | 204188..205219 (+) | 1032 | WP_129556365.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FGCSD_RS01150 (FGCSD_0181) | comYC | 205221..205547 (+) | 327 | WP_111714771.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGCSD_RS11205 (FGCSD_0182) | comGD | 205522..205950 (+) | 429 | WP_129555185.1 | competence type IV pilus minor pilin ComGD | - |
| FGCSD_RS01160 (FGCSD_0183) | comGE | 205907..206203 (+) | 297 | WP_129555186.1 | competence type IV pilus minor pilin ComGE | - |
| FGCSD_RS01165 (FGCSD_0184) | comGF | 206184..206624 (+) | 441 | WP_129555187.1 | competence type IV pilus minor pilin ComGF | - |
| FGCSD_RS01170 (FGCSD_0185) | comGG | 206602..206976 (+) | 375 | WP_129555188.1 | competence type IV pilus minor pilin ComGG | - |
| FGCSD_RS01175 (FGCSD_0186) | comYH | 207039..207992 (+) | 954 | WP_129555189.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGCSD_RS01180 (FGCSD_0187) | - | 208051..209247 (+) | 1197 | WP_129555190.1 | acetate kinase | - |
| FGCSD_RS01185 (FGCSD_0188) | - | 209553..209760 (+) | 208 | Protein_180 | helix-turn-helix transcriptional regulator | - |
| FGCSD_RS01190 (FGCSD_0189) | - | 209863..210543 (+) | 681 | WP_129555191.1 | type II CAAX endopeptidase family protein | - |
| FGCSD_RS01195 (FGCSD_0190) | - | 210561..210998 (+) | 438 | WP_129555192.1 | hypothetical protein | - |
| FGCSD_RS01200 (FGCSD_0191) | proC | 211091..211867 (-) | 777 | WP_129555193.1 | pyrroline-5-carboxylate reductase | - |
| FGCSD_RS01205 (FGCSD_0192) | pepA | 211914..212981 (-) | 1068 | WP_129555194.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36090.98 Da Isoelectric Point: 4.7292
>NTDB_id=70562 FGCSD_RS01175 WP_129555189.1 207039..207992(+) (comYH) [Streptococcus dysgalactiae strain Kdys0611]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEILEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLEPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPTETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEILEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLEPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPTETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=70562 FGCSD_RS01175 WP_129555189.1 207039..207992(+) (comYH) [Streptococcus dysgalactiae strain Kdys0611]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTTATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAATCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGCTTTGCCATTTTCTTGGAACCTGTGAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGCTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCTTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGACGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTTATTCTGCTGTATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAATCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGCTTTGCCATTTTCTTGGAACCTGTGAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGCTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCTTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGACGGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |