Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   NLY75_RS03185 Genome accession   NZ_CP100432
Coordinates   616023..617027 (+) Length   334 a.a.
NCBI ID   WP_014636430.1    Uniprot ID   -
Organism   Streptococcus suis T15     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 611023..622027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLY75_RS03160 (NLY75_03160) - 611958..612437 (+) 480 WP_023369675.1 PTS sugar transporter subunit IIB -
  NLY75_RS03165 (NLY75_03165) - 612453..613238 (+) 786 WP_014636434.1 PTS sugar transporter subunit IIC -
  NLY75_RS03170 (NLY75_03170) - 613231..614049 (+) 819 WP_023369677.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  NLY75_RS03175 (NLY75_03175) - 614062..614478 (+) 417 WP_014636432.1 PTS sugar transporter subunit IIA -
  NLY75_RS03180 (NLY75_03180) - 614734..615813 (-) 1080 WP_014636431.1 Xaa-Pro peptidase family protein -
  NLY75_RS03185 (NLY75_03185) ccpA 616023..617027 (+) 1005 WP_014636430.1 catabolite control protein A Regulator
  NLY75_RS03190 (NLY75_03190) - 617456..619291 (-) 1836 WP_024417469.1 FctA domain-containing protein -
  NLY75_RS03195 (NLY75_03195) - 619601..620599 (+) 999 WP_023369681.1 glycosyltransferase family 4 protein -
  NLY75_RS03200 (NLY75_03200) - 620600..621913 (+) 1314 WP_023369682.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36788.94 Da        Isoelectric Point: 5.5173

>NTDB_id=705310 NLY75_RS03185 WP_014636430.1 616023..617027(+) (ccpA) [Streptococcus suis T15]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYSLAERILNA
GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=705310 NLY75_RS03185 WP_014636430.1 616023..617027(+) (ccpA) [Streptococcus suis T15]
ATGTTAAACACTGACGATACGGTAACGATTTATGACGTTGCCCGCGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCAA
ATGCTGTTGCACGTGGCTTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAATATTGCTAATGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTGAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCAATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGGCCGCTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAAGGCTACTCTCTAGCAGAACGTATTTTGAATGCT
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTTTATTGAATGGTGTCAGTGATATGGGCGTCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATACGATATTGGTGCAATTGCTATGCGTATGCTCACCAAAATCATGCATAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(9-54)

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.88

99.701

0.796
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.58

99.701

0.793
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.912

99.102

0.584