Detailed information NTG0701106

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NF674_RS19025
• Genome accession: NZ_CP099610
• Coordinates: 4303991..4306225 (-)
• Length: 744 a.a.
• NCBI ID: WP_042610687.1
• Uniprot ID: A0AAE2ARA7
• Organism: Pseudomonas moraviensis strain OTU5VILLAA1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4298991..4311225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NF674_RS18990 (NF674_18990)	murB	4299368..4300387 (-)	1020	WP_042610692.1	UDP-N-acetylmuramate dehydrogenase	-
NF674_RS18995 (NF674_18995)	-	4300384..4300848 (-)	465	WP_064361450.1	low molecular weight protein-tyrosine-phosphatase	-
NF674_RS19000 (NF674_19000)	kdsB	4300848..4301612 (-)	765	WP_042610690.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NF674_RS19005 (NF674_19005)	-	4301609..4301794 (-)	186	WP_042610737.1	Trm112 family protein	-
NF674_RS19010 (NF674_19010)	lpxK	4301819..4302829 (-)	1011	WP_042610689.1	tetraacyldisaccharide 4'-kinase	-
NF674_RS19015 (NF674_19015)	-	4302829..4303257 (-)	429	WP_042610688.1	biopolymer transporter ExbD	-
NF674_RS19020 (NF674_19020)	exbB	4303254..4303889 (-)	636	WP_007908216.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
NF674_RS19025 (NF674_19025)	comA	4303991..4306225 (-)	2235	WP_042610687.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NF674_RS19030 (NF674_19030)	-	4306362..4306880 (+)	519	WP_042610686.1	DUF2062 domain-containing protein	-
NF674_RS19035 (NF674_19035)	-	4307021..4307800 (-)	780	WP_039760202.1	ABC transporter permease	-
NF674_RS19040 (NF674_19040)	-	4307797..4308729 (-)	933	WP_042610685.1	ABC transporter ATP-binding protein	-
NF674_RS19045 (NF674_19045)	-	4308863..4309486 (-)	624	WP_042610684.1	glutathione S-transferase	-
NF674_RS19050 (NF674_19050)	-	4309530..4310189 (-)	660	WP_042610683.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81971.22 Da
• Isoelectric Point: 9.6396

>NTDB_id=701106 NF674_RS19025 WP_042610687.1 4303991..4306225(-) (comA) [Pseudomonas moraviensis strain OTU5VILLAA1]
MRTGMMALAVGLLAPVFLPALPPVGWWVVLPVVALMLLPFRSYPLAFLLFGFTWACVGAQMALNDRLPPPLDGETRWLEG
RVVGLPQHGDGVVRFELADARSRHEKLPSLMRLAWYAGPPVNSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATG
TIKDGQRLAEARYAWRDRVRQRLLAVDAQGREGALAALVLGDGSGLSREDWQVLQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLARYGLWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVALVLLWRLRFRHLGAWWPLLLAFNGVLLFDPL
ASLRPGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALSLPISVSGPVANLLAVPWVSLVVLPPAL
LGTLLLPVPYVGEGLLWLAGGLIDWLFIGLALIAGRWPAWIPAAIPLWALVLGSLGALLLLLPRGVPLRPLGWPLMLLLI
LPPRERIEEGRADVWQLDVGQGLAILVRTRHHALLYDAGPRFGEFDLGERVVLPALRKLNMQTLDLMLLSHADADHAGGA
GAVMRGLDVHRIVSGDPPNLPPELSAEACASGEQWQWDGVQFQLWQWSAADDSNQRSCVLQIEANGERLLLTGDIDIHAE
RVLLDSPLAVPTQWLQSPHHGSRSSSSMALLKALQPEAVLISRGHGNSFGHPHPTVLARYRKQGLRIYDSAEQGAIHLQL
GSFKPPWTMRHQRRFWREPPAPGR

Nucleotide

• Length: 2235 bp

>NTDB_id=701106 NF674_RS19025 WP_042610687.1 4303991..4306225(-) (comA) [Pseudomonas moraviensis strain OTU5VILLAA1]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGCCCCGGTTTTTTTGCCGGCCTTGCCGCCGGTCGGTTGGTG
GGTGGTACTGCCGGTGGTGGCGCTGATGCTCCTACCGTTTCGCAGCTATCCACTGGCATTTTTGTTGTTTGGCTTCACAT
GGGCCTGCGTCGGCGCGCAGATGGCTCTGAATGACCGCTTGCCGCCGCCACTGGACGGCGAAACCCGTTGGCTCGAGGGG
CGTGTGGTCGGCTTGCCGCAGCACGGCGACGGTGTGGTGCGTTTCGAACTGGCTGACGCCCGCTCGCGCCACGAAAAGCT
GCCATCGCTGATGCGCCTGGCCTGGTACGCCGGGCCGCCGGTCAACAGCGGCGAACGCTGGCGTCTGGCGGTGAAGTTGA
AGCGCCCGGGTGGCTTGCTCAACCCGGACGCCTTCGATTACGAGGCCTGGCTGCTCGCCCAACGCATCGGTGCGACCGGT
ACGATCAAGGATGGCCAGCGTCTGGCTGAGGCACGGTACGCCTGGCGCGACAGGGTTCGTCAGCGCCTGCTGGCGGTCGA
TGCGCAGGGGCGAGAGGGCGCGTTGGCGGCGCTGGTGCTCGGCGACGGTTCGGGTCTGAGTCGCGAGGACTGGCAGGTAC
TGCAAGACACCGGCACCGTGCATTTGCTGGTGATTTCCGGCCAGCACATCGGTTTGCTCGCCGCAGTGATGTATCTGCTG
GTCGCCGGGCTTGCGCGATACGGTTTATGGCCGTTGCGCTGGCCATGGCTGCCCTGGGCATGCGGCCTGGCCTTCGCGGC
GGCGCTGGGTTATGGCTTGCTCGCCGGTTTCGATGTGCCGGTGCAGCGCGCCTGCGTGATGGTGGCGCTGGTGCTGTTGT
GGCGCCTGCGTTTTCGCCATCTCGGTGCGTGGTGGCCATTATTGCTGGCGTTCAACGGCGTGCTGCTGTTTGATCCGCTG
GCCAGTTTGCGTCCCGGGTTCTGGCTGTCTTTCGCCGCGGTGGCGGTACTGATTTTCACCTTCGGCGGGCGGCTGGGCGC
TTGGCGCTGGTGGCAGACCTGGACCCGCGCGCAGTGGCTGATCGCGATTGGTTTGTGCCCGGTGTTGCTGGCGCTCAGCC
TGCCGATCAGCGTCAGTGGCCCCGTGGCGAATCTGTTGGCGGTGCCGTGGGTCAGTCTTGTGGTATTGCCGCCGGCGTTG
CTCGGCACGCTATTGCTGCCCGTGCCTTATGTTGGCGAAGGGTTGTTGTGGCTGGCCGGTGGTTTGATCGACTGGCTGTT
TATCGGACTGGCGCTGATTGCCGGGCGATGGCCGGCGTGGATACCTGCCGCCATTCCATTGTGGGCGCTGGTCTTGGGCA
GCCTCGGCGCCTTGTTATTGCTGTTGCCCCGTGGTGTGCCGCTGCGTCCATTGGGCTGGCCGCTAATGTTACTGCTGATA
TTGCCGCCCCGAGAGCGAATAGAAGAGGGGCGGGCCGATGTCTGGCAACTCGACGTCGGCCAAGGCCTGGCCATCCTCGT
GCGCACCCGCCATCACGCGTTGCTCTATGACGCCGGGCCGCGTTTCGGCGAGTTCGATCTCGGCGAGCGAGTGGTGCTGC
CAGCGCTGCGCAAACTCAATATGCAAACGCTCGACCTGATGCTGCTCAGCCATGCCGACGCCGATCACGCTGGCGGCGCC
GGGGCGGTGATGCGTGGATTGGACGTGCACCGCATCGTCAGTGGCGACCCGCCAAACCTGCCGCCGGAGTTGAGCGCCGA
AGCCTGCGCAAGTGGCGAACAGTGGCAATGGGATGGCGTGCAGTTCCAGCTCTGGCAATGGTCGGCGGCCGATGACAGCA
ACCAGCGCTCCTGTGTCTTGCAGATCGAAGCCAACGGCGAGCGCCTGCTGCTCACCGGCGACATCGACATTCACGCTGAG
CGCGTTCTGCTCGACAGTCCACTGGCGGTGCCGACGCAGTGGCTGCAATCGCCCCATCACGGCAGTCGCAGCTCATCGTC
GATGGCCCTGCTCAAAGCCTTGCAGCCAGAAGCGGTGCTGATCTCCCGCGGCCACGGCAACTCCTTCGGTCACCCGCATC
CGACCGTACTTGCGCGCTACCGCAAGCAAGGCCTGCGCATCTATGACAGCGCCGAGCAGGGCGCCATCCATCTGCAACTG
GGCAGCTTCAAACCGCCGTGGACGATGCGTCACCAGCGGCGTTTCTGGCGCGAGCCGCCGGCGCCTGGCCGTTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (198-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.143	96.64	0.61
comA	Ralstonia pseudosolanacearum GMI1000	35.219	100	0.368